AnnoQ GraphQL API Query Functions

This package provides functions to query the AnnoQ GraphQL API for SNP annotations.

Installation

You can install the package directly from GitHub using the devtools package:

install.packages("devtools")
devtools::install_github("quemeb/AnnoQR")

Usage

Load the package and use the provided functions to perform queries.

library(AnnoQR)

# Define the annotations to retrieve
annotations_to_retrieve <- c("chr", "pos", "ref", "alt")

# Perform a region query
snps <- regionQuery("18", 1, 50000, annotations_to_retrieve)
head(snps)

# Perform an rsID query
snp <- rsidQuery("rs559687999", annotations_to_retrieve)
print(snp)

# Perform a multiple rsIDs query
snps <- rsidsQuery(c("rs115366554", "rs189126619"), annotations_to_retrieve)
print(snps)