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Apr 8, 2025
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8 changes: 4 additions & 4 deletions DESCRIPTION
Original file line number Diff line number Diff line change
@@ -1,12 +1,12 @@
Package: tcpl
Title: ToxCast Data Analysis Pipeline
Version: 3.2.0.9000
Version: 3.2.1
Authors@R: c(
person("Richard S", "Judson",role = c("ctb","ths"), comment = c(ORCID = "0000-0002-2348-9633")),
person("Dayne L", "Filer", role = "aut"),
person("Jason","Brown", role = "cre", email = "[email protected]", comment = c(ORCID = "0009-0000-2294-641X")),
person("Jason","Brown", role = "ctb", comment = c(ORCID = "0009-0000-2294-641X")),
person("Sarah E","Davidson-Fritz", role = "ctb",email = "[email protected]", comment = c(ORCID = "0000-0002-2891-9380")),
person("Madison","Feshuk",role = "ctb",email = "[email protected]", comment = c(ORCID = "0000-0002-1390-6405")),
person("Madison","Feshuk",role = "cre",email = "[email protected]", comment = c(ORCID = "0000-0002-1390-6405")),
person("Carter", "Thunes", role = "ctb", email = "[email protected]"),
person("Ashley", "Ko", role = "ctb", email = "[email protected]"),
person("Kelly", "Carstens", role = "ctb", email = "[email protected]", comment = c(ORCID = "0000-0002-1746-5379")),
Expand All @@ -21,7 +21,7 @@ Authors@R: c(
Description: The ToxCast Data Analysis Pipeline ('tcpl') is an R package that manages, curve-fits, plots, and stores ToxCast data to populate its linked MySQL database, 'invitrodb'. The package was developed for the chemical screening data curated by the US EPA's Toxicity Forecaster (ToxCast) program, but 'tcpl' can be used to support diverse chemical screening efforts.
URL: https://github.com/USEPA/CompTox-ToxCast-tcpl, https://www.epa.gov/comptox-tools/toxicity-forecasting-toxcast
Depends:
R (>= 3.5.0)
R (>= 4.1.0)
Imports:
data.table (>= 1.15.0),
DBI,
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4 changes: 3 additions & 1 deletion NEWS.md
Original file line number Diff line number Diff line change
@@ -1,4 +1,6 @@
# tcpl (development version)
# tcpl 3.2.1
* Updating Maintainer
* Change minimum R version to 4.1.0 to fix NOTES

# tcpl 3.2.0

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43 changes: 29 additions & 14 deletions cran-comments.md
Original file line number Diff line number Diff line change
@@ -1,27 +1,42 @@
* added single quotes to invitrodb and tcpl in DESCRIPTION
* fixed aeds URI

## Changes from last version
* To resolve current cran check results: added package anchors to links
* Updated docs and vignette
* Plotting updates
* Added API functionality
* Updating Maintainer
* Change minimum R version to 4.1.0 to fix NOTES

## Test environments

* local Windows 10 install, R 4.2.2
* R Under development (unstable) (2024-10-04 r87208 ucrt)
* local Windows 10 install, R 4.3.3
* R Under development (unstable) (2025-04-04 r88118 ucrt)

## winbuilder check results
Installation time in seconds: 13
Check time in seconds: 183
Status: OK
R Under development (unstable) (2024-10-08 r87214 ucrt)
* The only note is related to a change in maintainer
Installation time in seconds: 21
Check time in seconds: 299
Status: 1 NOTE
R version 4.5.0 RC (2025-04-04 r88118 ucrt)



## local R CMD check results
2 NOTES:
* We are switching maintainers so this first one is expected.
* We believe the unable to verify current time is a false positive unrelated to package.


── R CMD check results tcpl 3.2.1 ────
Duration: 5m 15.3s

❯ checking CRAN incoming feasibility ... [153s] NOTE
Maintainer: 'Madison Feshuk <[email protected]>'

New maintainer:
Madison Feshuk <[email protected]>
Old maintainer(s):
Jason Brown <[email protected]>

❯ checking for future file timestamps ... NOTE
unable to verify current time

0 ERRORs | 0 WARNINGs | 0 NOTES.
0 errors ✔ | 0 warnings ✔ | 2 notes ✖

## Downstream dependencies

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