UW-Macrostrat · davenquinn · Jan 5, 2026 · Jan 5, 2026 · Jan 5, 2026 · Jan 5, 2026
diff --git a/...ld_scripts/management-commands/.gitignore → ...ld_scripts/management-commands/.gitignore b/...ld_scripts/management-commands/.gitignore → ...ld_scripts/management-commands/.gitignore
diff --git a/...ts/management-commands/load-elevation-dev → ...ts/management-commands/load-elevation-dev b/...ts/management-commands/load-elevation-dev → ...ts/management-commands/load-elevation-dev
diff --git a/...ipts/management-commands/load-mariadb-dev → ...ipts/management-commands/load-mariadb-dev b/...ipts/management-commands/load-mariadb-dev → ...ipts/management-commands/load-mariadb-dev
diff --git a/...pts/management-commands/load-postgres-dev → ...pts/management-commands/load-postgres-dev b/...pts/management-commands/load-postgres-dev → ...pts/management-commands/load-postgres-dev
diff --git a/scripts/build-image → ...ive__/__old_scripts/packaging/build-image b/scripts/build-image → ...ive__/__old_scripts/packaging/build-image
diff --git a/scripts/prepare-services → .../__old_scripts/packaging/prepare-services b/scripts/prepare-services → .../__old_scripts/packaging/prepare-services
diff --git a/v2-transition/__old_scripts/strat-build-api → __archive__/__old_scripts/strat-build-api b/v2-transition/__old_scripts/strat-build-api → __archive__/__old_scripts/strat-build-api
diff --git a/...tion/__old_scripts/strat-build-tileserver → ...ve__/__old_scripts/strat-build-tileserver b/...tion/__old_scripts/strat-build-tileserver → ...ve__/__old_scripts/strat-build-tileserver
diff --git a/v2-transition/__old_scripts/strat-cli → __archive__/__old_scripts/strat-cli b/v2-transition/__old_scripts/strat-cli → __archive__/__old_scripts/strat-cli
diff --git a/v2-transition/__old_scripts/strat-cli-dev → __archive__/__old_scripts/strat-cli-dev b/v2-transition/__old_scripts/strat-cli-dev → __archive__/__old_scripts/strat-cli-dev
diff --git a/v2-transition/__old_scripts/strat-copy-data → __archive__/__old_scripts/strat-copy-data b/v2-transition/__old_scripts/strat-copy-data → __archive__/__old_scripts/strat-copy-data
diff --git a/...cripts/strat-copy-elevation-to-kubernetes → ...cripts/strat-copy-elevation-to-kubernetes b/...cripts/strat-copy-elevation-to-kubernetes → ...cripts/strat-copy-elevation-to-kubernetes
diff --git a/v2-transition/__old_scripts/strat-copy-local → __archive__/__old_scripts/strat-copy-local b/v2-transition/__old_scripts/strat-copy-local → __archive__/__old_scripts/strat-copy-local
diff --git a/v2-transition/__old_scripts/strat-corelle → __archive__/__old_scripts/strat-corelle b/v2-transition/__old_scripts/strat-corelle → __archive__/__old_scripts/strat-corelle
diff --git a/...n/__old_scripts/strat-create-ingestion-db → ..._/__old_scripts/strat-create-ingestion-db b/...n/__old_scripts/strat-create-ingestion-db → ..._/__old_scripts/strat-create-ingestion-db
diff --git a/..._old_scripts/strat-create-utah-extraction → ..._old_scripts/strat-create-utah-extraction b/..._old_scripts/strat-create-utah-extraction → ..._old_scripts/strat-create-utah-extraction
diff --git a/...sition/__old_scripts/strat-db-alterations → ...hive__/__old_scripts/strat-db-alterations b/...sition/__old_scripts/strat-db-alterations → ...hive__/__old_scripts/strat-db-alterations
diff --git a/v2-transition/__old_scripts/strat-deploy-dev → __archive__/__old_scripts/strat-deploy-dev b/v2-transition/__old_scripts/strat-deploy-dev → __archive__/__old_scripts/strat-deploy-dev
diff --git a/...ransition/__old_scripts/strat-dev-compose → __archive__/__old_scripts/strat-dev-compose b/...ransition/__old_scripts/strat-dev-compose → __archive__/__old_scripts/strat-dev-compose
diff --git a/...n/__old_scripts/strat-dump-database-local → ..._/__old_scripts/strat-dump-database-local b/...n/__old_scripts/strat-dump-database-local → ..._/__old_scripts/strat-dump-database-local
diff --git a/...n/__old_scripts/strat-dump-database-to-s3 → ..._/__old_scripts/strat-dump-database-to-s3 b/...n/__old_scripts/strat-dump-database-to-s3 → ..._/__old_scripts/strat-dump-database-to-s3
diff --git a/...old_scripts/strat-dump-dev-database-to-s3 → ...old_scripts/strat-dump-dev-database-to-s3 b/...old_scripts/strat-dump-dev-database-to-s3 → ...old_scripts/strat-dump-dev-database-to-s3
diff --git a/...ition/__old_scripts/strat-dump-macrostrat → ...ive__/__old_scripts/strat-dump-macrostrat b/...ition/__old_scripts/strat-dump-macrostrat → ...ive__/__old_scripts/strat-dump-macrostrat
diff --git a/...old_scripts/strat-dump-macrostrat-minimal → ...old_scripts/strat-dump-macrostrat-minimal b/...old_scripts/strat-dump-macrostrat-minimal → ...old_scripts/strat-dump-macrostrat-minimal
diff --git a/...ld_scripts/strat-dump-next-database-to-s3 → ...ld_scripts/strat-dump-next-database-to-s3 b/...ld_scripts/strat-dump-next-database-to-s3 → ...ld_scripts/strat-dump-next-database-to-s3
diff --git a/...ansition/__old_scripts/strat-export-local → __archive__/__old_scripts/strat-export-local b/...ansition/__old_scripts/strat-export-local → __archive__/__old_scripts/strat-export-local
diff --git a/v2-transition/__old_scripts/strat-export-map → __archive__/__old_scripts/strat-export-map b/v2-transition/__old_scripts/strat-export-map → __archive__/__old_scripts/strat-export-map
diff --git a/...ansition/__old_scripts/strat-export-query → __archive__/__old_scripts/strat-export-query b/...ansition/__old_scripts/strat-export-query → __archive__/__old_scripts/strat-export-query
diff --git a/...ition/__old_scripts/strat-follow-logs-dev → ...ive__/__old_scripts/strat-follow-logs-dev b/...ition/__old_scripts/strat-follow-logs-dev → ...ive__/__old_scripts/strat-follow-logs-dev
diff --git a/...ansition/__old_scripts/strat-install-deps → __archive__/__old_scripts/strat-install-deps b/...ansition/__old_scripts/strat-install-deps → __archive__/__old_scripts/strat-install-deps
diff --git a/...ition/__old_scripts/strat-load-macrostrat → ...ive__/__old_scripts/strat-load-macrostrat b/...ition/__old_scripts/strat-load-macrostrat → ...ive__/__old_scripts/strat-load-macrostrat
diff --git a/v2-transition/__old_scripts/strat-load-maps → __archive__/__old_scripts/strat-load-maps b/v2-transition/__old_scripts/strat-load-maps → __archive__/__old_scripts/strat-load-maps
diff --git a/...ansition/__old_scripts/strat-load-mariadb → __archive__/__old_scripts/strat-load-mariadb b/...ansition/__old_scripts/strat-load-mariadb → __archive__/__old_scripts/strat-load-mariadb
diff --git a/v2-transition/__old_scripts/strat-load-rockd → __archive__/__old_scripts/strat-load-rockd b/v2-transition/__old_scripts/strat-load-rockd → __archive__/__old_scripts/strat-load-rockd
diff --git a/...ransition/__old_scripts/strat-reset-cache → __archive__/__old_scripts/strat-reset-cache b/...ransition/__old_scripts/strat-reset-cache → __archive__/__old_scripts/strat-reset-cache
diff --git a/...ansition/__old_scripts/strat-stage-source → __archive__/__old_scripts/strat-stage-source b/...ansition/__old_scripts/strat-stage-source → __archive__/__old_scripts/strat-stage-source
diff --git a/v2-transition/__old_scripts/strat-tileserver → __archive__/__old_scripts/strat-tileserver b/v2-transition/__old_scripts/strat-tileserver → __archive__/__old_scripts/strat-tileserver
diff --git a/...sition/__old_scripts/strat-tileserver-dev → ...hive__/__old_scripts/strat-tileserver-dev b/...sition/__old_scripts/strat-tileserver-dev → ...hive__/__old_scripts/strat-tileserver-dev
diff --git a/...tion/__old_scripts/strat-tileserver-tests → ...ve__/__old_scripts/strat-tileserver-tests b/...tion/__old_scripts/strat-tileserver-tests → ...ve__/__old_scripts/strat-tileserver-tests
diff --git a/v2-transition/__old_scripts/strat-tunnel → __archive__/__old_scripts/strat-tunnel b/v2-transition/__old_scripts/strat-tunnel → __archive__/__old_scripts/strat-tunnel
diff --git a/v2-transition/__old_scripts/strat-up → __archive__/__old_scripts/strat-up b/v2-transition/__old_scripts/strat-up → __archive__/__old_scripts/strat-up
diff --git a/v2-transition/__old_scripts/strat-upgrade-db → __archive__/__old_scripts/strat-upgrade-db b/v2-transition/__old_scripts/strat-upgrade-db → __archive__/__old_scripts/strat-upgrade-db
diff --git a/...tion/__old_apps/column-builder/.gitignore → __archive__/column-builder/.gitignore b/...tion/__old_apps/column-builder/.gitignore → __archive__/column-builder/.gitignore
diff --git a/...on/__old_apps/column-builder/CHANGELOG.md → __archive__/column-builder/CHANGELOG.md b/...on/__old_apps/column-builder/CHANGELOG.md → __archive__/column-builder/CHANGELOG.md
diff --git a/...sition/__old_apps/column-builder/Makefile → __archive__/column-builder/Makefile b/...sition/__old_apps/column-builder/Makefile → __archive__/column-builder/Makefile
diff --git a/...ition/__old_apps/column-builder/README.md → __archive__/column-builder/README.md b/...ition/__old_apps/column-builder/README.md → __archive__/column-builder/README.md
diff --git a/...d_apps/column-builder/docker-compose.yaml → ...hive__/column-builder/docker-compose.yaml b/...d_apps/column-builder/docker-compose.yaml → ...hive__/column-builder/docker-compose.yaml
diff --git a/...ion/__old_apps/column-builder/env.example → __archive__/column-builder/env.example b/...ion/__old_apps/column-builder/env.example → __archive__/column-builder/env.example
diff --git a/...ion/__old_apps/column-builder/workflow.md → __archive__/column-builder/workflow.md b/...ion/__old_apps/column-builder/workflow.md → __archive__/column-builder/workflow.md
diff --git a/cli/macrostrat/cli/subsystems/__init__.py → ...base-upgrades/postgrest_tests/__init__.py b/cli/macrostrat/cli/subsystems/__init__.py → ...base-upgrades/postgrest_tests/__init__.py
diff --git a/...base-upgrades/postgrest_tests/conftest.py → ...base-upgrades/postgrest_tests/conftest.py b/...base-upgrades/postgrest_tests/conftest.py → ...base-upgrades/postgrest_tests/conftest.py
diff --git a/...ades/postgrest_tests/fixtures/__init__.py → ...ades/postgrest_tests/fixtures/__init__.py b/...ades/postgrest_tests/fixtures/__init__.py → ...ades/postgrest_tests/fixtures/__init__.py
diff --git a/...pgrades/postgrest_tests/fixtures/auth.sql → ...pgrades/postgrest_tests/fixtures/auth.sql b/...pgrades/postgrest_tests/fixtures/auth.sql → ...pgrades/postgrest_tests/fixtures/auth.sql
diff --git a/...rest_tests/fixtures/test_auth_inserts.sql → ...rest_tests/fixtures/test_auth_inserts.sql b/...rest_tests/fixtures/test_auth_inserts.sql → ...rest_tests/fixtures/test_auth_inserts.sql
diff --git a/...postgrest_tests/fixtures/test_inserts.sql → ...postgrest_tests/fixtures/test_inserts.sql b/...postgrest_tests/fixtures/test_inserts.sql → ...postgrest_tests/fixtures/test_inserts.sql
diff --git a/...pgrades/postgrest_tests/test_postgrest.py → ...pgrades/postgrest_tests/test_postgrest.py b/...pgrades/postgrest_tests/test_postgrest.py → ...pgrades/postgrest_tests/test_postgrest.py
diff --git a/...e-upgrades/postgrest_tests/test_z_auth.py → ...e-upgrades/postgrest_tests/test_z_auth.py b/...e-upgrades/postgrest_tests/test_z_auth.py → ...e-upgrades/postgrest_tests/test_z_auth.py
diff --git a/...database-upgrades/tests-sql/recursion.sql → ...database-upgrades/tests-sql/recursion.sql b/...database-upgrades/tests-sql/recursion.sql → ...database-upgrades/tests-sql/recursion.sql
diff --git a/map-staging/.DS_Store b/map-staging/.DS_Store
diff --git a/map-staging/macrostrat/map_staging/Arizona Gems Scraping/.DS_Store b/map-staging/macrostrat/map_staging/Arizona Gems Scraping/.DS_Store
diff --git a/cli/.gitignore → py-modules/cli/.gitignore b/cli/.gitignore → py-modules/cli/.gitignore
diff --git a/cli/Dockerfile → py-modules/cli/Dockerfile b/cli/Dockerfile → py-modules/cli/Dockerfile
diff --git a/cli/Makefile → py-modules/cli/Makefile b/cli/Makefile → py-modules/cli/Makefile
diff --git a/cli/README.md → py-modules/cli/README.md b/cli/README.md → py-modules/cli/README.md
diff --git a/cli/archive/credentials.yml.example → ...dules/cli/archive/credentials.yml.example b/cli/archive/credentials.yml.example → ...dules/cli/archive/credentials.yml.example
diff --git a/cli/archive/reprocess.py → py-modules/cli/archive/reprocess.py b/cli/archive/reprocess.py → py-modules/cli/archive/reprocess.py
diff --git a/cli/archive/reprocess_units.py → py-modules/cli/archive/reprocess_units.py b/cli/archive/reprocess_units.py → py-modules/cli/archive/reprocess_units.py
diff --git a/cli/docs/cli-usage.md → py-modules/cli/docs/cli-usage.md b/cli/docs/cli-usage.md → py-modules/cli/docs/cli-usage.md
diff --git a/cli/macrostrat/cli/__init__.py → py-modules/cli/macrostrat/cli/__init__.py b/cli/macrostrat/cli/__init__.py → py-modules/cli/macrostrat/cli/__init__.py
diff --git a/cli/macrostrat/cli/__main__.py → py-modules/cli/macrostrat/cli/__main__.py b/cli/macrostrat/cli/__main__.py → py-modules/cli/macrostrat/cli/__main__.py
diff --git a/cli/macrostrat/cli/cache.py → py-modules/cli/macrostrat/cli/cache.py b/cli/macrostrat/cli/cache.py → py-modules/cli/macrostrat/cli/cache.py
diff --git a/cli/macrostrat/cli/commands/__init__.py → ...s/cli/macrostrat/cli/commands/__init__.py b/cli/macrostrat/cli/commands/__init__.py → ...s/cli/macrostrat/cli/commands/__init__.py
diff --git a/cli/macrostrat/cli/commands/backup.py → ...les/cli/macrostrat/cli/commands/backup.py b/cli/macrostrat/cli/commands/backup.py → ...les/cli/macrostrat/cli/commands/backup.py
diff --git a/cli/macrostrat/cli/commands/base.py → ...dules/cli/macrostrat/cli/commands/base.py b/cli/macrostrat/cli/commands/base.py → ...dules/cli/macrostrat/cli/commands/base.py
diff --git a/cli/macrostrat/cli/commands/export.py → ...les/cli/macrostrat/cli/commands/export.py b/cli/macrostrat/cli/commands/export.py → ...les/cli/macrostrat/cli/commands/export.py
diff --git a/...at/cli/commands/export_scripts/delete.sql → ...at/cli/commands/export_scripts/delete.sql b/...at/cli/commands/export_scripts/delete.sql → ...at/cli/commands/export_scripts/delete.sql
diff --git a/.../commands/export_scripts/delete_carto.sql → .../commands/export_scripts/delete_carto.sql b/.../commands/export_scripts/delete_carto.sql → .../commands/export_scripts/delete_carto.sql
diff --git a/cli/macrostrat/cli/commands/match.py → ...ules/cli/macrostrat/cli/commands/match.py b/cli/macrostrat/cli/commands/match.py → ...ules/cli/macrostrat/cli/commands/match.py
diff --git a/...at/cli/commands/match_scripts/__init__.py → ...at/cli/commands/match_scripts/__init__.py b/...at/cli/commands/match_scripts/__init__.py → ...at/cli/commands/match_scripts/__init__.py
diff --git a/...ands/match_scripts/fossils_strat_names.py → ...ands/match_scripts/fossils_strat_names.py b/...ands/match_scripts/fossils_strat_names.py → ...ands/match_scripts/fossils_strat_names.py
diff --git a/cli/macrostrat/cli/commands/process.py → ...es/cli/macrostrat/cli/commands/process.py b/cli/macrostrat/cli/commands/process.py → ...es/cli/macrostrat/cli/commands/process.py
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diff --git a/...rat/cli/commands/process_scripts/carto.py → ...rat/cli/commands/process_scripts/carto.py b/...rat/cli/commands/process_scripts/carto.py → ...rat/cli/commands/process_scripts/carto.py
diff --git a/...i/commands/process_scripts/carto_lines.py → ...i/commands/process_scripts/carto_lines.py b/...i/commands/process_scripts/carto_lines.py → ...i/commands/process_scripts/carto_lines.py
diff --git a/...li/commands/process_scripts/map_source.py → ...li/commands/process_scripts/map_source.py b/...li/commands/process_scripts/map_source.py → ...li/commands/process_scripts/map_source.py
diff --git a/...cli/commands/process_scripts/tesselate.py → ...cli/commands/process_scripts/tesselate.py b/...cli/commands/process_scripts/tesselate.py → ...cli/commands/process_scripts/tesselate.py
diff --git a/cli/macrostrat/cli/commands/rebuild.py → ...es/cli/macrostrat/cli/commands/rebuild.py b/cli/macrostrat/cli/commands/rebuild.py → ...es/cli/macrostrat/cli/commands/rebuild.py
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diff --git a/.../commands/rebuild_scripts/autocomplete.py → .../commands/rebuild_scripts/autocomplete.py b/.../commands/rebuild_scripts/autocomplete.py → .../commands/rebuild_scripts/autocomplete.py
diff --git a/...nds/rebuild_scripts/lookup_strat_names.py → ...nds/rebuild_scripts/lookup_strat_names.py b/...nds/rebuild_scripts/lookup_strat_names.py → ...nds/rebuild_scripts/lookup_strat_names.py
diff --git a/.../rebuild_scripts/lookup_unit_attrs_api.py → .../rebuild_scripts/lookup_unit_attrs_api.py b/.../rebuild_scripts/lookup_unit_attrs_api.py → .../rebuild_scripts/lookup_unit_attrs_api.py
diff --git a/.../rebuild_scripts/lookup_unit_intervals.py → .../rebuild_scripts/lookup_unit_intervals.py b/.../rebuild_scripts/lookup_unit_intervals.py → .../rebuild_scripts/lookup_unit_intervals.py
diff --git a/.../commands/rebuild_scripts/lookup_units.py → .../commands/rebuild_scripts/lookup_units.py b/.../commands/rebuild_scripts/lookup_units.py → .../commands/rebuild_scripts/lookup_units.py
diff --git a/.../commands/rebuild_scripts/pbdb_matches.py → .../commands/rebuild_scripts/pbdb_matches.py b/.../commands/rebuild_scripts/pbdb_matches.py → .../commands/rebuild_scripts/pbdb_matches.py
diff --git a/...rat/cli/commands/rebuild_scripts/stats.py → ...rat/cli/commands/rebuild_scripts/stats.py b/...rat/cli/commands/rebuild_scripts/stats.py → ...rat/cli/commands/rebuild_scripts/stats.py
diff --git a/.../rebuild_scripts/strat_name_footprints.py → .../rebuild_scripts/strat_name_footprints.py b/.../rebuild_scripts/strat_name_footprints.py → .../rebuild_scripts/strat_name_footprints.py
diff --git a/...mmands/rebuild_scripts/unit_boundaries.py → ...mmands/rebuild_scripts/unit_boundaries.py b/...mmands/rebuild_scripts/unit_boundaries.py → ...mmands/rebuild_scripts/unit_boundaries.py
diff --git a/cli/macrostrat/cli/database/__init__.py → ...s/cli/macrostrat/cli/database/__init__.py b/cli/macrostrat/cli/database/__init__.py → ...s/cli/macrostrat/cli/database/__init__.py
diff --git a/cli/macrostrat/cli/database/_legacy.py → ...es/cli/macrostrat/cli/database/_legacy.py b/cli/macrostrat/cli/database/_legacy.py → ...es/cli/macrostrat/cli/database/_legacy.py
diff --git a/...crostrat/cli/database/mariadb/__init__.py → ...crostrat/cli/database/mariadb/__init__.py b/...crostrat/cli/database/mariadb/__init__.py → ...crostrat/cli/database/mariadb/__init__.py
diff --git a/.../mariadb/postgresql_migration/__init__.py → .../mariadb/postgresql_migration/__init__.py b/.../mariadb/postgresql_migration/__init__.py → .../mariadb/postgresql_migration/__init__.py
diff --git a/...gration-scripts/_schlep-index_scripts.sql → ...gration-scripts/_schlep-index_scripts.sql b/...gration-scripts/_schlep-index_scripts.sql → ...gration-scripts/_schlep-index_scripts.sql
diff --git a/...-migration-scripts/col_areas/1-create.sql → ...-migration-scripts/col_areas/1-create.sql b/...-migration-scripts/col_areas/1-create.sql → ...-migration-scripts/col_areas/1-create.sql
diff --git a/...-migration-scripts/col_areas/2-insert.sql → ...-migration-scripts/col_areas/2-insert.sql b/...-migration-scripts/col_areas/2-insert.sql → ...-migration-scripts/col_areas/2-insert.sql
diff --git a/...d-migration-scripts/col_areas/3-index.sql → ...d-migration-scripts/col_areas/3-index.sql b/...d-migration-scripts/col_areas/3-index.sql → ...d-migration-scripts/col_areas/3-index.sql
diff --git a/...migration-scripts/col_areas/4-process.sql → ...migration-scripts/col_areas/4-process.sql b/...migration-scripts/col_areas/4-process.sql → ...migration-scripts/col_areas/4-process.sql
diff --git a/...ipts/col_areas/_old-migration-scripts.sql → ...ipts/col_areas/_old-migration-scripts.sql b/...ipts/col_areas/_old-migration-scripts.sql → ...ipts/col_areas/_old-migration-scripts.sql
diff --git a/...on/_old-migration-scripts/cols/0-dump.sql → ...on/_old-migration-scripts/cols/0-dump.sql b/...on/_old-migration-scripts/cols/0-dump.sql → ...on/_old-migration-scripts/cols/0-dump.sql
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diff --git a/.../_old-migration-scripts/cols/2-insert.sql → .../_old-migration-scripts/cols/2-insert.sql b/.../_old-migration-scripts/cols/2-insert.sql → .../_old-migration-scripts/cols/2-insert.sql
diff --git a/...n/_old-migration-scripts/cols/3-index.sql → ...n/_old-migration-scripts/cols/3-index.sql b/...n/_old-migration-scripts/cols/3-index.sql → ...n/_old-migration-scripts/cols/3-index.sql
diff --git a/..._old-migration-scripts/cols/4-process.sql → ..._old-migration-scripts/cols/4-process.sql b/..._old-migration-scripts/cols/4-process.sql → ..._old-migration-scripts/cols/4-process.sql
diff --git a/...ld-migration-scripts/intervals/0-dump.sql → ...ld-migration-scripts/intervals/0-dump.sql b/...ld-migration-scripts/intervals/0-dump.sql → ...ld-migration-scripts/intervals/0-dump.sql
diff --git a/...-migration-scripts/intervals/1-create.sql → ...-migration-scripts/intervals/1-create.sql b/...-migration-scripts/intervals/1-create.sql → ...-migration-scripts/intervals/1-create.sql
diff --git a/...-migration-scripts/intervals/2-insert.sql → ...-migration-scripts/intervals/2-insert.sql b/...-migration-scripts/intervals/2-insert.sql → ...-migration-scripts/intervals/2-insert.sql
diff --git a/...d-migration-scripts/intervals/3-index.sql → ...d-migration-scripts/intervals/3-index.sql b/...d-migration-scripts/intervals/3-index.sql → ...d-migration-scripts/intervals/3-index.sql
diff --git a/...migration-scripts/intervals/4-process.sql → ...migration-scripts/intervals/4-process.sql b/...migration-scripts/intervals/4-process.sql → ...migration-scripts/intervals/4-process.sql
diff --git a/...-scripts/lookup_unit_intervals/0-dump.sql → ...-scripts/lookup_unit_intervals/0-dump.sql b/...-scripts/lookup_unit_intervals/0-dump.sql → ...-scripts/lookup_unit_intervals/0-dump.sql
diff --git a/...cripts/lookup_unit_intervals/1-create.sql → ...cripts/lookup_unit_intervals/1-create.sql b/...cripts/lookup_unit_intervals/1-create.sql → ...cripts/lookup_unit_intervals/1-create.sql
diff --git a/...cripts/lookup_unit_intervals/2-insert.sql → ...cripts/lookup_unit_intervals/2-insert.sql b/...cripts/lookup_unit_intervals/2-insert.sql → ...cripts/lookup_unit_intervals/2-insert.sql
diff --git a/...scripts/lookup_unit_intervals/3-index.sql → ...scripts/lookup_unit_intervals/3-index.sql b/...scripts/lookup_unit_intervals/3-index.sql → ...scripts/lookup_unit_intervals/3-index.sql
diff --git a/...ripts/lookup_unit_intervals/4-process.sql → ...ripts/lookup_unit_intervals/4-process.sql b/...ripts/lookup_unit_intervals/4-process.sql → ...ripts/lookup_unit_intervals/4-process.sql
diff --git a/...-migration-scripts/measuremeta/0-dump.sql → ...-migration-scripts/measuremeta/0-dump.sql b/...-migration-scripts/measuremeta/0-dump.sql → ...-migration-scripts/measuremeta/0-dump.sql
diff --git a/...igration-scripts/measuremeta/1-create.sql → ...igration-scripts/measuremeta/1-create.sql b/...igration-scripts/measuremeta/1-create.sql → ...igration-scripts/measuremeta/1-create.sql
diff --git a/...igration-scripts/measuremeta/2-insert.sql → ...igration-scripts/measuremeta/2-insert.sql b/...igration-scripts/measuremeta/2-insert.sql → ...igration-scripts/measuremeta/2-insert.sql
diff --git a/...migration-scripts/measuremeta/3-index.sql → ...migration-scripts/measuremeta/3-index.sql b/...migration-scripts/measuremeta/3-index.sql → ...migration-scripts/measuremeta/3-index.sql
diff --git a/...ation-scripts/pbdb_collections/0-dump.sql → ...ation-scripts/pbdb_collections/0-dump.sql b/...ation-scripts/pbdb_collections/0-dump.sql → ...ation-scripts/pbdb_collections/0-dump.sql
diff --git a/...ion-scripts/pbdb_collections/1-create.sql → ...ion-scripts/pbdb_collections/1-create.sql b/...ion-scripts/pbdb_collections/1-create.sql → ...ion-scripts/pbdb_collections/1-create.sql
diff --git a/...ion-scripts/pbdb_collections/2-insert.sql → ...ion-scripts/pbdb_collections/2-insert.sql b/...ion-scripts/pbdb_collections/2-insert.sql → ...ion-scripts/pbdb_collections/2-insert.sql
diff --git a/...tion-scripts/pbdb_collections/3-index.sql → ...tion-scripts/pbdb_collections/3-index.sql b/...tion-scripts/pbdb_collections/3-index.sql → ...tion-scripts/pbdb_collections/3-index.sql
diff --git a/...on-scripts/pbdb_collections/4-process.sql → ...on-scripts/pbdb_collections/4-process.sql b/...on-scripts/pbdb_collections/4-process.sql → ...on-scripts/pbdb_collections/4-process.sql
diff --git a/...d-migration-scripts/strat_tree/0-dump.sql → ...d-migration-scripts/strat_tree/0-dump.sql b/...d-migration-scripts/strat_tree/0-dump.sql → ...d-migration-scripts/strat_tree/0-dump.sql
diff --git a/...migration-scripts/strat_tree/1-create.sql → ...migration-scripts/strat_tree/1-create.sql b/...migration-scripts/strat_tree/1-create.sql → ...migration-scripts/strat_tree/1-create.sql
diff --git a/...migration-scripts/strat_tree/2-insert.sql → ...migration-scripts/strat_tree/2-insert.sql b/...migration-scripts/strat_tree/2-insert.sql → ...migration-scripts/strat_tree/2-insert.sql
diff --git a/...-migration-scripts/strat_tree/3-index.sql → ...-migration-scripts/strat_tree/3-index.sql b/...-migration-scripts/strat_tree/3-index.sql → ...-migration-scripts/strat_tree/3-index.sql
diff --git a/...n/_old-migration-scripts/units/0-dump.sql → ...n/_old-migration-scripts/units/0-dump.sql b/...n/_old-migration-scripts/units/0-dump.sql → ...n/_old-migration-scripts/units/0-dump.sql
diff --git a/..._old-migration-scripts/units/1-create.sql → ..._old-migration-scripts/units/1-create.sql b/..._old-migration-scripts/units/1-create.sql → ..._old-migration-scripts/units/1-create.sql
diff --git a/..._old-migration-scripts/units/2-insert.sql → ..._old-migration-scripts/units/2-insert.sql b/..._old-migration-scripts/units/2-insert.sql → ..._old-migration-scripts/units/2-insert.sql
diff --git a/.../_old-migration-scripts/units/3-index.sql → .../_old-migration-scripts/units/3-index.sql b/.../_old-migration-scripts/units/3-index.sql → .../_old-migration-scripts/units/3-index.sql
diff --git a/...ariadb/postgresql_migration/db_changes.py → ...ariadb/postgresql_migration/db_changes.py b/...ariadb/postgresql_migration/db_changes.py → ...ariadb/postgresql_migration/db_changes.py
diff --git a/...gresql_migration/pgloader-post-script.sql → ...gresql_migration/pgloader-post-script.sql b/...gresql_migration/pgloader-post-script.sql → ...gresql_migration/pgloader-post-script.sql
diff --git a/...tgresql_migration/pgloader-pre-script.sql → ...tgresql_migration/pgloader-pre-script.sql b/...tgresql_migration/pgloader-pre-script.sql → ...tgresql_migration/pgloader-pre-script.sql
diff --git a/...ql_migration/preserve-macrostrat-data.sql → ...ql_migration/preserve-macrostrat-data.sql b/...ql_migration/preserve-macrostrat-data.sql → ...ql_migration/preserve-macrostrat-data.sql
diff --git a/...adb/postgresql_migration/requirements.txt → ...adb/postgresql_migration/requirements.txt b/...adb/postgresql_migration/requirements.txt → ...adb/postgresql_migration/requirements.txt
diff --git a/...acrostrat/cli/database/mariadb/restore.py → ...acrostrat/cli/database/mariadb/restore.py b/...acrostrat/cli/database/mariadb/restore.py → ...acrostrat/cli/database/mariadb/restore.py
diff --git a/cli/macrostrat/cli/database/mariadb/utils.py → .../macrostrat/cli/database/mariadb/utils.py b/cli/macrostrat/cli/database/mariadb/utils.py → .../macrostrat/cli/database/mariadb/utils.py
diff --git a/cli/macrostrat/cli/database/utils.py → ...ules/cli/macrostrat/cli/database/utils.py b/cli/macrostrat/cli/database/utils.py → ...ules/cli/macrostrat/cli/database/utils.py
diff --git a/cli/macrostrat/cli/entrypoint.py → py-modules/cli/macrostrat/cli/entrypoint.py b/cli/macrostrat/cli/entrypoint.py → py-modules/cli/macrostrat/cli/entrypoint.py
diff --git a/cli/macrostrat/cli/kubernetes/__init__.py → ...cli/macrostrat/cli/kubernetes/__init__.py b/cli/macrostrat/cli/kubernetes/__init__.py → ...cli/macrostrat/cli/kubernetes/__init__.py
diff --git a/cli/macrostrat/cli/rebuild/__init__.py → ...es/cli/macrostrat/cli/rebuild/__init__.py b/cli/macrostrat/cli/rebuild/__init__.py → ...es/cli/macrostrat/cli/rebuild/__init__.py
diff --git a/cli/macrostrat/cli/rebuild/lookup_units.py → ...li/macrostrat/cli/rebuild/lookup_units.py b/cli/macrostrat/cli/rebuild/lookup_units.py → ...li/macrostrat/cli/rebuild/lookup_units.py
diff --git a/cli/macrostrat/cli/rockd.py → py-modules/cli/macrostrat/cli/rockd.py b/cli/macrostrat/cli/rockd.py → py-modules/cli/macrostrat/cli/rockd.py
diff --git a/...rat/cli/schema_management/__disabled__.py → ...rat/cli/schema_management/__disabled__.py b/...rat/cli/schema_management/__disabled__.py → ...rat/cli/schema_management/__disabled__.py
diff --git a/...schema_management/__disabled__pgschema.py → ...schema_management/__disabled__pgschema.py b/...schema_management/__disabled__pgschema.py → ...schema_management/__disabled__pgschema.py
diff --git a/...rostrat/cli/schema_management/__init__.py → ...rostrat/cli/schema_management/__init__.py b/...rostrat/cli/schema_management/__init__.py → ...rostrat/cli/schema_management/__init__.py
diff --git a/cli/macrostrat/cli/schema_management/defs.py → .../macrostrat/cli/schema_management/defs.py b/cli/macrostrat/cli/schema_management/defs.py → .../macrostrat/cli/schema_management/defs.py
diff --git a/...cli/schema_management/migration_system.py → ...cli/schema_management/migration_system.py b/...cli/schema_management/migration_system.py → ...cli/schema_management/migration_system.py
diff --git a/...trat/map_integration/commands/__init__.py → ...cli/macrostrat/cli/subsystems/__init__.py b/...trat/map_integration/commands/__init__.py → ...cli/macrostrat/cli/subsystems/__init__.py
diff --git a/...acrostrat/cli/subsystems/core/__init__.py → ...acrostrat/cli/subsystems/core/__init__.py b/...acrostrat/cli/subsystems/core/__init__.py → ...acrostrat/cli/subsystems/core/__init__.py
diff --git a/...t/cli/subsystems/criticalmaas/__init__.py → ...t/cli/subsystems/criticalmaas/__init__.py b/...t/cli/subsystems/criticalmaas/__init__.py → ...t/cli/subsystems/criticalmaas/__init__.py
diff --git a/...at/cli/subsystems/criticalmaas/helpers.py → ...at/cli/subsystems/criticalmaas/helpers.py b/...at/cli/subsystems/criticalmaas/helpers.py → ...at/cli/subsystems/criticalmaas/helpers.py
diff --git a/...t/cli/subsystems/criticalmaas/importer.py → ...t/cli/subsystems/criticalmaas/importer.py b/...t/cli/subsystems/criticalmaas/importer.py → ...t/cli/subsystems/criticalmaas/importer.py
diff --git a/...trat/cli/subsystems/criticalmaas/steps.py → ...trat/cli/subsystems/criticalmaas/steps.py b/...trat/cli/subsystems/criticalmaas/steps.py → ...trat/cli/subsystems/criticalmaas/steps.py
diff --git a/...criticalmaas/test/data/bc_kananaskis.gpkg → ...criticalmaas/test/data/bc_kananaskis.gpkg b/...criticalmaas/test/data/bc_kananaskis.gpkg → ...criticalmaas/test/data/bc_kananaskis.gpkg
diff --git a/cli/macrostrat/cli/subsystems/dev.py → ...ules/cli/macrostrat/cli/subsystems/dev.py b/cli/macrostrat/cli/subsystems/dev.py → ...ules/cli/macrostrat/cli/subsystems/dev.py
diff --git a/...cli/subsystems/macrostrat_api/__init__.py → ...cli/subsystems/macrostrat_api/__init__.py b/...cli/subsystems/macrostrat_api/__init__.py → ...cli/subsystems/macrostrat_api/__init__.py
diff --git a/...at_api/schema/01-column-builder-views.sql → ...at_api/schema/01-column-builder-views.sql b/...at_api/schema/01-column-builder-views.sql → ...at_api/schema/01-column-builder-views.sql
diff --git a/...pi/schema/02-column-builder-functions.sql → ...pi/schema/02-column-builder-functions.sql b/...pi/schema/02-column-builder-functions.sql → ...pi/schema/02-column-builder-functions.sql
diff --git a/...ystems/macrostrat_api/schema/03-roles.sql → ...ystems/macrostrat_api/schema/03-roles.sql b/...ystems/macrostrat_api/schema/03-roles.sql → ...ystems/macrostrat_api/schema/03-roles.sql
diff --git a/..._api/schema/__archive/04-igcp-orogens.sql → ..._api/schema/__archive/04-igcp-orogens.sql b/..._api/schema/__archive/04-igcp-orogens.sql → ..._api/schema/__archive/04-igcp-orogens.sql
diff --git a/...rostrat_api/schema/__archive/05-users.sql → ...rostrat_api/schema/__archive/05-users.sql b/...rostrat_api/schema/__archive/05-users.sql → ...rostrat_api/schema/__archive/05-users.sql
diff --git a/...s/macrostrat_api/testing/API testing.http → ...s/macrostrat_api/testing/API testing.http b/...s/macrostrat_api/testing/API testing.http → ...s/macrostrat_api/testing/API testing.http
diff --git a/...strat/cli/subsystems/mapboard/__init__.py → ...strat/cli/subsystems/mapboard/__init__.py b/...strat/cli/subsystems/mapboard/__init__.py → ...strat/cli/subsystems/mapboard/__init__.py
diff --git a/...acrostrat/cli/subsystems/maps/__init__.py → ...acrostrat/cli/subsystems/maps/__init__.py b/...acrostrat/cli/subsystems/maps/__init__.py → ...acrostrat/cli/subsystems/maps/__init__.py
diff --git a/...ystems/maps/fixtures/01-create-tables.sql → ...ystems/maps/fixtures/01-create-tables.sql b/...ystems/maps/fixtures/01-create-tables.sql → ...ystems/maps/fixtures/01-create-tables.sql
diff --git a/...ems/maps/fixtures/02-map-compilations.sql → ...ems/maps/fixtures/02-map-compilations.sql b/...ems/maps/fixtures/02-map-compilations.sql → ...ems/maps/fixtures/02-map-compilations.sql
diff --git a/...bsystems/maps/fixtures/03-fill-tables.sql → ...bsystems/maps/fixtures/03-fill-tables.sql b/...bsystems/maps/fixtures/03-fill-tables.sql → ...bsystems/maps/fixtures/03-fill-tables.sql
diff --git a/.../subsystems/maps/legend-liths-summary.sql → .../subsystems/maps/legend-liths-summary.sql b/.../subsystems/maps/legend-liths-summary.sql → .../subsystems/maps/legend-liths-summary.sql
diff --git a/...procedures/clear-extra-topogeometries.sql → ...procedures/clear-extra-topogeometries.sql b/...procedures/clear-extra-topogeometries.sql → ...procedures/clear-extra-topogeometries.sql
diff --git a/...ubsystems/maps/procedures/drop-tables.sql → ...ubsystems/maps/procedures/drop-tables.sql b/...ubsystems/maps/procedures/drop-tables.sql → ...ubsystems/maps/procedures/drop-tables.sql
diff --git a/...procedures/update-topology-fix-errors.sql → ...procedures/update-topology-fix-errors.sql b/...procedures/update-topology-fix-errors.sql → ...procedures/update-topology-fix-errors.sql
diff --git a/...s/maps/procedures/update-topology-row.sql → ...s/maps/procedures/update-topology-row.sql b/...s/maps/procedures/update-topology-row.sql → ...s/maps/procedures/update-topology-row.sql
diff --git a/...cli/subsystems/paleogeography/__init__.py → ...cli/subsystems/paleogeography/__init__.py b/...cli/subsystems/paleogeography/__init__.py → ...cli/subsystems/paleogeography/__init__.py
diff --git a/...ogeography/corelle/__disabled-indexes.sql → ...ogeography/corelle/__disabled-indexes.sql b/...ogeography/corelle/__disabled-indexes.sql → ...ogeography/corelle/__disabled-indexes.sql
diff --git a/...ystems/paleogeography/corelle/__init__.py → ...ystems/paleogeography/corelle/__init__.py b/...ystems/paleogeography/corelle/__init__.py → ...ystems/paleogeography/corelle/__init__.py
diff --git a/...orelle/fixtures/01-corelle-macrostrat.sql → ...orelle/fixtures/01-corelle-macrostrat.sql b/...orelle/fixtures/01-corelle-macrostrat.sql → ...orelle/fixtures/01-corelle-macrostrat.sql
diff --git a/...orelle/fixtures/02-carto-slim-rotated.sql → ...orelle/fixtures/02-carto-slim-rotated.sql b/...orelle/fixtures/02-carto-slim-rotated.sql → ...orelle/fixtures/02-carto-slim-rotated.sql
diff --git a/...y/corelle/sql/carto-plate-index-cache.sql → ...y/corelle/sql/carto-plate-index-cache.sql b/...y/corelle/sql/carto-plate-index-cache.sql → ...y/corelle/sql/carto-plate-index-cache.sql
diff --git a/...crostrat/cli/subsystems/rockd/__init__.py → ...crostrat/cli/subsystems/rockd/__init__.py b/...crostrat/cli/subsystems/rockd/__init__.py → ...crostrat/cli/subsystems/rockd/__init__.py
diff --git a/.../rockd/migrations/0010-rockd-tms-defs.sql → .../rockd/migrations/0010-rockd-tms-defs.sql b/.../rockd/migrations/0010-rockd-tms-defs.sql → .../rockd/migrations/0010-rockd-tms-defs.sql
diff --git a/...ockd/migrations/0011-rockd-tile-utils.sql → ...ockd/migrations/0011-rockd-tile-utils.sql b/...ockd/migrations/0011-rockd-tile-utils.sql → ...ockd/migrations/0011-rockd-tile-utils.sql
diff --git a/...rockd/migrations/0012-user-privileges.sql → ...rockd/migrations/0012-user-privileges.sql b/...rockd/migrations/0012-user-privileges.sql → ...rockd/migrations/0012-user-privileges.sql
diff --git a/...kd/migrations/0020-integration-tokens.sql → ...kd/migrations/0020-integration-tokens.sql b/...kd/migrations/0020-integration-tokens.sql → ...kd/migrations/0020-integration-tokens.sql
diff --git a/...ckd/migrations/0030-usage-stats-table.sql → ...ckd/migrations/0030-usage-stats-table.sql b/...ckd/migrations/0030-usage-stats-table.sql → ...ckd/migrations/0030-usage-stats-table.sql
diff --git a/...migrations/0040-model-feedback-schema.sql → ...migrations/0040-model-feedback-schema.sql b/...migrations/0040-model-feedback-schema.sql → ...migrations/0040-model-feedback-schema.sql
diff --git a/...kd/migrations/0050-strabo-integration.sql → ...kd/migrations/0050-strabo-integration.sql b/...kd/migrations/0050-strabo-integration.sql → ...kd/migrations/0050-strabo-integration.sql
diff --git a/...i/subsystems/rockd/migrations/__init__.py → ...i/subsystems/rockd/migrations/__init__.py b/...i/subsystems/rockd/migrations/__init__.py → ...i/subsystems/rockd/migrations/__init__.py
diff --git a/...macrostrat/cli/subsystems/sgp/__init__.py → ...macrostrat/cli/subsystems/sgp/__init__.py b/...macrostrat/cli/subsystems/sgp/__init__.py → ...macrostrat/cli/subsystems/sgp/__init__.py
diff --git a/...trat/cli/subsystems/sgp/match/__init__.py → ...trat/cli/subsystems/sgp/match/__init__.py b/...trat/cli/subsystems/sgp/match/__init__.py → ...trat/cli/subsystems/sgp/match/__init__.py
diff --git a/...crostrat/cli/subsystems/sgp/migrations.py → ...crostrat/cli/subsystems/sgp/migrations.py b/...crostrat/cli/subsystems/sgp/migrations.py → ...crostrat/cli/subsystems/sgp/migrations.py
diff --git a/...trat/cli/subsystems/sgp/paleogeography.py → ...trat/cli/subsystems/sgp/paleogeography.py b/...trat/cli/subsystems/sgp/paleogeography.py → ...trat/cli/subsystems/sgp/paleogeography.py
diff --git a/.../subsystems/sgp/sql/all-match-samples.sql → .../subsystems/sgp/sql/all-match-samples.sql b/.../subsystems/sgp/sql/all-match-samples.sql → .../subsystems/sgp/sql/all-match-samples.sql
diff --git a/...trat/cli/subsystems/sgp/sql/api-views.sql → ...trat/cli/subsystems/sgp/sql/api-views.sql b/...trat/cli/subsystems/sgp/sql/api-views.sql → ...trat/cli/subsystems/sgp/sql/api-views.sql
diff --git a/.../cli/subsystems/sgp/sql/copy-sgp-data.sql → .../cli/subsystems/sgp/sql/copy-sgp-data.sql b/.../cli/subsystems/sgp/sql/copy-sgp-data.sql → .../cli/subsystems/sgp/sql/copy-sgp-data.sql
diff --git a/...rat/cli/subsystems/sgp/sql/create-fdw.sql → ...rat/cli/subsystems/sgp/sql/create-fdw.sql b/...rat/cli/subsystems/sgp/sql/create-fdw.sql → ...rat/cli/subsystems/sgp/sql/create-fdw.sql
diff --git a/.../cli/subsystems/sgp/sql/match-results.sql → .../cli/subsystems/sgp/sql/match-results.sql b/.../cli/subsystems/sgp/sql/match-results.sql → .../cli/subsystems/sgp/sql/match-results.sql
diff --git a/...ystems/sgp/sql/paleogeography-samples.sql → ...ystems/sgp/sql/paleogeography-samples.sql b/...ystems/sgp/sql/paleogeography-samples.sql → ...ystems/sgp/sql/paleogeography-samples.sql
diff --git a/...rostrat/cli/subsystems/sgp/sql/schema.sql → ...rostrat/cli/subsystems/sgp/sql/schema.sql b/...rostrat/cli/subsystems/sgp/sql/schema.sql → ...rostrat/cli/subsystems/sgp/sql/schema.sql
diff --git a/...trat/cli/subsystems/sgp/test_sgp_match.py → ...trat/cli/subsystems/sgp/test_sgp_match.py b/...trat/cli/subsystems/sgp/test_sgp_match.py → ...trat/cli/subsystems/sgp/test_sgp_match.py
diff --git a/cli/macrostrat/cli/subsystems/sgp/utils.py → ...li/macrostrat/cli/subsystems/sgp/utils.py b/cli/macrostrat/cli/subsystems/sgp/utils.py → ...li/macrostrat/cli/subsystems/sgp/utils.py
diff --git a/cli/macrostrat/cli/subsystems/storage.py → .../cli/macrostrat/cli/subsystems/storage.py b/cli/macrostrat/cli/subsystems/storage.py → .../cli/macrostrat/cli/subsystems/storage.py
diff --git a/...acrostrat/cli/subsystems/test/__init__.py → ...acrostrat/cli/subsystems/test/__init__.py b/...acrostrat/cli/subsystems/test/__init__.py → ...acrostrat/cli/subsystems/test/__init__.py
diff --git a/...or_embeddings/vector-schema-migration.sql → ...or_embeddings/vector-schema-migration.sql b/...or_embeddings/vector-schema-migration.sql → ...or_embeddings/vector-schema-migration.sql
diff --git a/...li/subsystems/xdd/__archive/kg-schema.sql → ...li/subsystems/xdd/__archive/kg-schema.sql b/...li/subsystems/xdd/__archive/kg-schema.sql → ...li/subsystems/xdd/__archive/kg-schema.sql
diff --git a/...macrostrat/cli/subsystems/xdd/__init__.py → ...macrostrat/cli/subsystems/xdd/__init__.py b/...macrostrat/cli/subsystems/xdd/__init__.py → ...macrostrat/cli/subsystems/xdd/__init__.py
diff --git a/.../cli/subsystems/xdd/fixtures/kg-views.sql → .../cli/subsystems/xdd/fixtures/kg-views.sql b/.../cli/subsystems/xdd/fixtures/kg-views.sql → .../cli/subsystems/xdd/fixtures/kg-views.sql
diff --git a/...ubsystems/xdd/fixtures/macrostrat-xdd.sql → ...ubsystems/xdd/fixtures/macrostrat-xdd.sql b/...ubsystems/xdd/fixtures/macrostrat-xdd.sql → ...ubsystems/xdd/fixtures/macrostrat-xdd.sql
diff --git a/.../subsystems/xdd/fixtures/text-vectors.sql → .../subsystems/xdd/fixtures/text-vectors.sql b/.../subsystems/xdd/fixtures/text-vectors.sql → .../subsystems/xdd/fixtures/text-vectors.sql
diff --git a/...systems/xdd/ref/macrostrat-xdd.schema.sql → ...systems/xdd/ref/macrostrat-xdd.schema.sql b/...systems/xdd/ref/macrostrat-xdd.schema.sql → ...systems/xdd/ref/macrostrat-xdd.schema.sql
diff --git a/.../subsystems/xdd/ref/update-xdd-schema.sql → .../subsystems/xdd/ref/update-xdd-schema.sql b/.../subsystems/xdd/ref/update-xdd-schema.sql → .../subsystems/xdd/ref/update-xdd-schema.sql
diff --git a/cli/macrostrat/cli/utils.py → py-modules/cli/macrostrat/cli/utils.py b/cli/macrostrat/cli/utils.py → py-modules/cli/macrostrat/cli/utils.py
diff --git a/cli/macrostrat/cli/v1_entrypoint.py → ...dules/cli/macrostrat/cli/v1_entrypoint.py b/cli/macrostrat/cli/v1_entrypoint.py → ...dules/cli/macrostrat/cli/v1_entrypoint.py
diff --git a/cli/pyproject.toml → py-modules/cli/pyproject.toml b/cli/pyproject.toml → py-modules/cli/pyproject.toml
@@ -74,9 +74,9 @@ default-groups = [
 "macrostrat.map-integration" = { path = "../map-integration", editable = true }
 "macrostrat.core" = { path = "../core", editable = true }
 "macrostrat.integrations" = { path = "../integrations", editable = true }
-"mapboard.topology-manager" = { path = "../submodules/topology-manager", editable = true }
-"htpheno.radosgw-admin-client" = { path = "../submodules/storage-admin", editable = true }
-"macrostrat.match-utils" = { path = "../py-modules/match-utils", editable = true }
+"mapboard.topology-manager" = { path = "../../submodules/topology-manager", editable = true }
+"htpheno.radosgw-admin-client" = { path = "../../submodules/storage-admin", editable = true }
+"macrostrat.match-utils" = { path = "../match-utils", editable = true }
 
 [tool.hatch.build.targets.sdist]
 include = ["macrostrat"]

diff --git a/cli/tests/macrostrat.test.toml → py-modules/cli/tests/macrostrat.test.toml b/cli/tests/macrostrat.test.toml → py-modules/cli/tests/macrostrat.test.toml
diff --git a/cli/tests/test_cli.py → py-modules/cli/tests/test_cli.py b/cli/tests/test_cli.py → py-modules/cli/tests/test_cli.py
diff --git a/cli/tests/test_environment.py → py-modules/cli/tests/test_environment.py b/cli/tests/test_environment.py → py-modules/cli/tests/test_environment.py
diff --git a/cli/uv.lock → py-modules/cli/uv.lock b/cli/uv.lock → py-modules/cli/uv.lock
diff --git a/core/macrostrat/core/__init__.py → py-modules/core/macrostrat/core/__init__.py b/core/macrostrat/core/__init__.py → py-modules/core/macrostrat/core/__init__.py
diff --git a/core/macrostrat/core/config.py → py-modules/core/macrostrat/core/config.py b/core/macrostrat/core/config.py → py-modules/core/macrostrat/core/config.py
@@ -43,7 +43,7 @@ def __init__(self, *args, **kwargs):
 
         # TODO: this enables sketchy behavior and tight coupling and should be removed.
         # However it is a useful hack for now
-        self.srcroot = Path(__file__).parent.parent.parent.parent
+        self.srcroot = Path(__file__).parent.parent.parent.parent.parent
 
     def all_environments(self):
         # Parse out top-level headers from TOML file

diff --git a/core/macrostrat/core/console.py → py-modules/core/macrostrat/core/console.py b/core/macrostrat/core/console.py → py-modules/core/macrostrat/core/console.py
diff --git a/core/macrostrat/core/database/__init__.py → ...core/macrostrat/core/database/__init__.py b/core/macrostrat/core/database/__init__.py → ...core/macrostrat/core/database/__init__.py
diff --git a/core/macrostrat/core/exc.py → py-modules/core/macrostrat/core/exc.py b/core/macrostrat/core/exc.py → py-modules/core/macrostrat/core/exc.py
diff --git a/core/macrostrat/core/main.py → py-modules/core/macrostrat/core/main.py b/core/macrostrat/core/main.py → py-modules/core/macrostrat/core/main.py
diff --git a/core/macrostrat/core/migrations/__init__.py → ...re/macrostrat/core/migrations/__init__.py b/core/macrostrat/core/migrations/__init__.py → ...re/macrostrat/core/migrations/__init__.py
diff --git a/core/macrostrat/core/resolvers.py → py-modules/core/macrostrat/core/resolvers.py b/core/macrostrat/core/resolvers.py → py-modules/core/macrostrat/core/resolvers.py
diff --git a/core/macrostrat/core/schemas.py → py-modules/core/macrostrat/core/schemas.py b/core/macrostrat/core/schemas.py → py-modules/core/macrostrat/core/schemas.py
diff --git a/core/macrostrat/core/utils.py → py-modules/core/macrostrat/core/utils.py b/core/macrostrat/core/utils.py → py-modules/core/macrostrat/core/utils.py
diff --git a/core/pyproject.toml → py-modules/core/pyproject.toml b/core/pyproject.toml → py-modules/core/pyproject.toml
diff --git a/core/uv.lock → py-modules/core/uv.lock b/core/uv.lock → py-modules/core/uv.lock
diff --git a/integrations/README.md → py-modules/integrations/README.md b/integrations/README.md → py-modules/integrations/README.md
diff --git a/...tions/macrostrat/integrations/__init__.py → ...tions/macrostrat/integrations/__init__.py b/...tions/macrostrat/integrations/__init__.py → ...tions/macrostrat/integrations/__init__.py
diff --git a/...acrostrat/integrations/schema/__init__.py → ...acrostrat/integrations/schema/__init__.py b/...acrostrat/integrations/schema/__init__.py → ...acrostrat/integrations/schema/__init__.py
diff --git a/...trat/integrations/schema/integrations.sql → ...trat/integrations/schema/integrations.sql b/...trat/integrations/schema/integrations.sql → ...trat/integrations/schema/integrations.sql
diff --git a/...strat/integrations/strabospot/__init__.py → ...strat/integrations/strabospot/__init__.py b/...strat/integrations/strabospot/__init__.py → ...strat/integrations/strabospot/__init__.py
diff --git a/integrations/pyproject.toml → py-modules/integrations/pyproject.toml b/integrations/pyproject.toml → py-modules/integrations/pyproject.toml
diff --git a/map-integration/.env.example → py-modules/map-integration/.env.example b/map-integration/.env.example → py-modules/map-integration/.env.example
diff --git a/map-integration/.gitignore → py-modules/map-integration/.gitignore b/map-integration/.gitignore → py-modules/map-integration/.gitignore
diff --git a/map-integration/Makefile → py-modules/map-integration/Makefile b/map-integration/Makefile → py-modules/map-integration/Makefile
diff --git a/map-integration/NEW_PROCESS_NOTES.md → ...ules/map-integration/NEW_PROCESS_NOTES.md b/map-integration/NEW_PROCESS_NOTES.md → ...ules/map-integration/NEW_PROCESS_NOTES.md
diff --git a/map-integration/README.md → py-modules/map-integration/README.md b/map-integration/README.md → py-modules/map-integration/README.md
diff --git a/map-integration/TODO.md → py-modules/map-integration/TODO.md b/map-integration/TODO.md → py-modules/map-integration/TODO.md
diff --git a/...gration/__archive/credentials.example.yml → ...gration/__archive/credentials.example.yml b/...gration/__archive/credentials.example.yml → ...gration/__archive/credentials.example.yml
diff --git a/map-integration/__archive/import → py-modules/map-integration/__archive/import b/map-integration/__archive/import → py-modules/map-integration/__archive/import
diff --git a/...tegration/__archive/matching/add_match.py → ...tegration/__archive/matching/add_match.py b/...tegration/__archive/matching/add_match.py → ...tegration/__archive/matching/add_match.py
diff --git a/...gration/__archive/matching/match_units.py → ...gration/__archive/matching/match_units.py b/...gration/__archive/matching/match_units.py → ...gration/__archive/matching/match_units.py
diff --git a/...n/__archive/matching/match_units_multi.py → ...n/__archive/matching/match_units_multi.py b/...n/__archive/matching/match_units_multi.py → ...n/__archive/matching/match_units_multi.py
diff --git a/...ration/__archive/matching/remove_match.py → ...ration/__archive/matching/remove_match.py b/...ration/__archive/matching/remove_match.py → ...ration/__archive/matching/remove_match.py
diff --git a/...on/__archive/matching/strat_name_match.py → ...on/__archive/matching/strat_name_match.py b/...on/__archive/matching/strat_name_match.py → ...on/__archive/matching/strat_name_match.py
diff --git a/map-integration/__archive/package.json → ...es/map-integration/__archive/package.json b/map-integration/__archive/package.json → ...es/map-integration/__archive/package.json
diff --git a/map-integration/__archive/process_source.py → ...p-integration/__archive/process_source.py b/map-integration/__archive/process_source.py → ...p-integration/__archive/process_source.py
diff --git a/..._archive/setup/create_elevation_stats.sql → ..._archive/setup/create_elevation_stats.sql b/..._archive/setup/create_elevation_stats.sql → ..._archive/setup/create_elevation_stats.sql
diff --git a/...tion/__archive/setup/elevation_schema.sql → ...tion/__archive/setup/elevation_schema.sql b/...tion/__archive/setup/elevation_schema.sql → ...tion/__archive/setup/elevation_schema.sql
diff --git a/...tion/__archive/setup/import_macrostrat.py → ...tion/__archive/setup/import_macrostrat.py b/...tion/__archive/setup/import_macrostrat.py → ...tion/__archive/setup/import_macrostrat.py
diff --git a/map-integration/__archive/setup/refresh.py → ...ap-integration/__archive/setup/refresh.py b/map-integration/__archive/setup/refresh.py → ...ap-integration/__archive/setup/refresh.py
diff --git a/...gration/__archive/setup/refresh_lookup.py → ...gration/__archive/setup/refresh_lookup.py b/...gration/__archive/setup/refresh_lookup.py → ...gration/__archive/setup/refresh_lookup.py
diff --git a/map-integration/__archive/setup/schema.sql → ...ap-integration/__archive/setup/schema.sql b/map-integration/__archive/setup/schema.sql → ...ap-integration/__archive/setup/schema.sql
diff --git a/...ve/tile-tester/leaflet-starter/index.html → ...ve/tile-tester/leaflet-starter/index.html b/...ve/tile-tester/leaflet-starter/index.html → ...ve/tile-tester/leaflet-starter/index.html
diff --git a/...e/tile-tester/leaflet-starter/vector.html → ...e/tile-tester/leaflet-starter/vector.html b/...e/tile-tester/leaflet-starter/vector.html → ...e/tile-tester/leaflet-starter/vector.html
diff --git a/...ration/__archive/tile-tester/package.json → ...ration/__archive/tile-tester/package.json b/...ration/__archive/tile-tester/package.json → ...ration/__archive/tile-tester/package.json
diff --git a/...tegration/__archive/tile-tester/server.js → ...tegration/__archive/tile-tester/server.js b/...tegration/__archive/tile-tester/server.js → ...tegration/__archive/tile-tester/server.js
diff --git a/...ation/__archive/tile-tester/tileserver.js → ...ation/__archive/tile-tester/tileserver.js b/...ation/__archive/tile-tester/tileserver.js → ...ation/__archive/tile-tester/tileserver.js
diff --git a/map-integration/__archive/tiles/README.md → ...map-integration/__archive/tiles/README.md b/map-integration/__archive/tiles/README.md → ...map-integration/__archive/tiles/README.md
diff --git a/...gration/__archive/tiles/compile_styles.js → ...gration/__archive/tiles/compile_styles.js b/...gration/__archive/tiles/compile_styles.js → ...gration/__archive/tiles/compile_styles.js
diff --git a/map-integration/__archive/tiles/config.js → ...map-integration/__archive/tiles/config.js b/map-integration/__archive/tiles/config.js → ...map-integration/__archive/tiles/config.js
diff --git a/map-integration/__archive/tiles/package.json → ...-integration/__archive/tiles/package.json b/map-integration/__archive/tiles/package.json → ...-integration/__archive/tiles/package.json
diff --git a/map-integration/__archive/tiles/seed → ...ules/map-integration/__archive/tiles/seed b/map-integration/__archive/tiles/seed → ...ules/map-integration/__archive/tiles/seed
diff --git a/map-integration/__archive/tiles/seeder.js → ...map-integration/__archive/tiles/seeder.js b/map-integration/__archive/tiles/seeder.js → ...map-integration/__archive/tiles/seeder.js
diff --git a/map-integration/__archive/tiles/setup.js → .../map-integration/__archive/tiles/setup.js b/map-integration/__archive/tiles/setup.js → .../map-integration/__archive/tiles/setup.js
diff --git a/...ntegration/__archive/tiles/setupVector.js → ...ntegration/__archive/tiles/setupVector.js b/...ntegration/__archive/tiles/setupVector.js → ...ntegration/__archive/tiles/setupVector.js
diff --git a/...ntegration/__archive/tiles/simple_seed.js → ...ntegration/__archive/tiles/simple_seed.js b/...ntegration/__archive/tiles/simple_seed.js → ...ntegration/__archive/tiles/simple_seed.js
diff --git a/...ion/__archive/tiles/styles/emphasized.css → ...ion/__archive/tiles/styles/emphasized.css b/...ion/__archive/tiles/styles/emphasized.css → ...ion/__archive/tiles/styles/emphasized.css
diff --git a/...egration/__archive/tiles/styles/lines.css → ...egration/__archive/tiles/styles/lines.css b/...egration/__archive/tiles/styles/lines.css → ...egration/__archive/tiles/styles/lines.css
diff --git a/...on/__archive/tiles/styles/lithologies.css → ...on/__archive/tiles/styles/lithologies.css b/...on/__archive/tiles/styles/lithologies.css → ...on/__archive/tiles/styles/lithologies.css
diff --git a/...ion/__archive/tiles/styles/structures.css → ...ion/__archive/tiles/styles/structures.css b/...ion/__archive/tiles/styles/structures.css → ...ion/__archive/tiles/styles/structures.css
diff --git a/...ration/__archive/tiles/styles/vanilla.css → ...ration/__archive/tiles/styles/vanilla.css b/...ration/__archive/tiles/styles/vanilla.css → ...ration/__archive/tiles/styles/vanilla.css
diff --git a/...integration/__archive/tiles/tileRoller.js → ...integration/__archive/tiles/tileRoller.js b/...integration/__archive/tiles/tileRoller.js → ...integration/__archive/tiles/tileRoller.js
diff --git a/...egration/__archive/translate/translate.js → ...egration/__archive/translate/translate.js b/...egration/__archive/translate/translate.js → ...egration/__archive/translate/translate.js
diff --git a/map-integration/__archive/utils/carto.py → .../map-integration/__archive/utils/carto.py b/map-integration/__archive/utils/carto.py → .../map-integration/__archive/utils/carto.py
diff --git a/...ntegration/__archive/utils/carto_lines.py → ...ntegration/__archive/utils/carto_lines.py b/...ntegration/__archive/utils/carto_lines.py → ...ntegration/__archive/utils/carto_lines.py
diff --git a/...ntegration/__archive/utils/createCarto.js → ...ntegration/__archive/utils/createCarto.js b/...ntegration/__archive/utils/createCarto.js → ...ntegration/__archive/utils/createCarto.js
diff --git a/map-integration/__archive/utils/dump.sh → ...s/map-integration/__archive/utils/dump.sh b/map-integration/__archive/utils/dump.sh → ...s/map-integration/__archive/utils/dump.sh
diff --git a/...ation/__archive/utils/go_to_production.sh → ...ation/__archive/utils/go_to_production.sh b/...ation/__archive/utils/go_to_production.sh → ...ation/__archive/utils/go_to_production.sh
diff --git a/map-integration/__archive/utils/move.py → ...s/map-integration/__archive/utils/move.py b/map-integration/__archive/utils/move.py → ...s/map-integration/__archive/utils/move.py
diff --git a/...ntegration/__archive/utils/move_source.js → ...ntegration/__archive/utils/move_source.js b/...ntegration/__archive/utils/move_source.js → ...ntegration/__archive/utils/move_source.js
diff --git a/map-integration/__archive/utils/rgeom.py → .../map-integration/__archive/utils/rgeom.py b/map-integration/__archive/utils/rgeom.py → .../map-integration/__archive/utils/rgeom.py
diff --git a/...egration/__archive/utils/schlep_source.py → ...egration/__archive/utils/schlep_source.py b/...egration/__archive/utils/schlep_source.py → ...egration/__archive/utils/schlep_source.py
diff --git a/...ntegration/__archive/utils/updateCarto.js → ...ntegration/__archive/utils/updateCarto.js b/...ntegration/__archive/utils/updateCarto.js → ...ntegration/__archive/utils/updateCarto.js
diff --git a/...ation/__archive/utils/updateCartoLines.js → ...ation/__archive/utils/updateCartoLines.js b/...ation/__archive/utils/updateCartoLines.js → ...ation/__archive/utils/updateCartoLines.js
diff --git a/map-integration/__archive/utils/web_geom.py → ...p-integration/__archive/utils/web_geom.py b/map-integration/__archive/utils/web_geom.py → ...p-integration/__archive/utils/web_geom.py
diff --git a/map-integration/cleaning-sql/example-sql.sql → ...-integration/cleaning-sql/example-sql.sql b/map-integration/cleaning-sql/example-sql.sql → ...-integration/cleaning-sql/example-sql.sql