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Add AlphaFold citations to docs and ProteinStructureView component #663

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Add AlphaFold citations to docs and ProteinStructureView component #663

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6 changes: 6 additions & 0 deletions docs/content/finding-data/visualizations.md
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Expand Up @@ -87,6 +87,12 @@ The viewer displays a side-by-side heatmap and 3D structure sourced from the [Al
<figcaption>Protein structure viewer from <a href="https://mavedb.org/score-sets/urn:mavedb:00000050-a-1">urn:mavedb:00000050-a-1</a>, showing mean variant effect scores mapped onto the MSH2 3D structure.</figcaption>
</figure>

References:
<ul class="list-disc text-xs italic text-gray-400 ml-5 px-2 py-1">
<li>Jumper, J et al. Highly accurate protein structure prediction with AlphaFold. <em>Nature</em> (2021)</li>
<li>Fleming J. et al. AlphaFold Protein Structure Database and 3D-Beacons: New Data and Capabilities. <em>Journal of Molecular Biology</em> (2025)</li>
Comment on lines +92 to +93
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@bencap bencap Apr 30, 2026

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Minor nitpick on the style, one of these has a comma after the last name while the other doesn't.

</ul>

## See also

- [Score calibrations](../reference/score-calibrations.md) -- learn how calibration data drives classification overlays in histograms and heatmaps.
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4 changes: 4 additions & 0 deletions src/components/score-set/ProteinStructureView.vue
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Expand Up @@ -10,6 +10,10 @@
</div>
<div v-show="selectedAlphaFold" id="pdbe-molstar-viewer-container" class="flex-1 relative z-5000"></div>
<div v-if="!selectedAlphaFold" class="m-auto">No AlphaFold entry found</div>
<ul class="list-disc text-xs italic text-gray-400 ml-5 px-2 py-1">
<li>Jumper, J et al. Highly accurate protein structure prediction with AlphaFold. <em>Nature</em> (2021)</li>
<li>Fleming J. et al. AlphaFold Protein Structure Database and 3D-Beacons: New Data and Capabilities. <em>Journal of Molecular Biology</em> (2025)</li>
</ul>
</div>
</template>

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