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feat(tl): add ancestral_linkage #52

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Merged
colganwi merged 3 commits into from
Mar 27, 2026
Merged

feat(tl): add ancestral_linkage #52

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8a6a745
feat(tl): add ancestral_linkage for measuring tree-based category rel…
colganwi Mar 24, 2026
f778001
feat(tl): add alternative parameter to ancestral_linkage for two-side…
colganwi Mar 24, 2026
ed8ce9b
fix(tl): harden ancestral_linkage against three correctness issues
colganwi Mar 27, 2026
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1 change: 1 addition & 0 deletions pyproject.toml
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Expand Up @@ -34,6 +34,7 @@ dependencies = [
"scikit-learn",
"scipy",
"session-info",
"tqdm",
"treedata>=0.2.2",
]

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1 change: 1 addition & 0 deletions src/pycea/tl/__init__.py
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@@ -1,3 +1,4 @@
from .ancestral_linkage import ancestral_linkage
from .ancestral_states import ancestral_states
from .autocorr import autocorr
from .clades import clades
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