🧹 Update npm dependencies (minor/patch) and fix lint warnings

[YunosukeYoshino]

🎯 What
Updated npm dependencies within their minor and patch semantic version ranges and addressed the resulting build/lint warnings.

💡 Why
To keep the project dependencies up-to-date with security patches and bug fixes while avoiding breaking major changes.

✅ Verification
Ran the full validation suite (bun run check, bun run typecheck, bun run test, and bun run test:e2e). All checks pass. Migrated biome.json config and addressed an SVG accessibility linting warning that was flagged by the updated biome linter.

✨ Result
Dependencies are updated and build processes run clean without errors or warnings.

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PR created automatically by Jules for task 1231723793170960975 started by @YunosukeYoshino

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