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fix release date and conda command
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andrewprzh committed Feb 8, 2020
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6 changes: 3 additions & 3 deletions README.md
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rnaQUAST is a tool for evaluating RNA-Seq assemblies using reference genome and gene database. In addition, rnaQUAST is also capable of estimating gene database coverage by raw reads and _de novo_ quality assessment using third-party software.

rnaQUAST version 2.0.0 was released under GPLv2 on February 5th, 2020 and can be downloaded from [http://cab.spbu.ru/software/rnaquast/](http://cab.spbu.ru/software/rnaquast/) or [https://github.com/ablab/rnaquast/releases](https://github.com/ablab/rnaquast/releases).
rnaQUAST version 2.0.0 was released under GPLv2 on February 8th, 2020 and can be downloaded from [http://cab.spbu.ru/software/rnaquast/](http://cab.spbu.ru/software/rnaquast/) or [https://github.com/ablab/rnaquast/releases](https://github.com/ablab/rnaquast/releases).

**For impatient people:**

* You will need Python, [gffutils](https://pythonhosted.org/gffutils/installation.html), [matplotlib](http://matplotlib.org/) and [joblib](https://joblib.readthedocs.io/en/latest/). Also you will need [GMAP](http://research-pub.gene.com/gmap/) (or [BLAT](http://hgwdev.cse.ucsc.edu/~kent/exe/)) and [BLASTN](http://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/) installed on your machine and added to the `$PATH` variable.

* You may also install rnaQUAST via conda

conda install -c rnaquast -c bioconda rnaquast
conda install -c bioconda rnaquast

* To verify your installation run

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rnaQUAST can be installed via conda:

conda install -c rnaquast -c bioconda rnaquast
conda install -c bioconda rnaquast

If you wish to run rnaQUAST from [the release archive](https://github.com/ablab/rnaquast/releases) you need:

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2 changes: 1 addition & 1 deletion changelog.html
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<h2>rnaQUAST changelog (since version 1.6)</h2>

<h3>rnaQUAST 2.0.0, 5 February 2020</h3>
<h3>rnaQUAST 2.0.0, 8 February 2020</h3>

<p>NEW: Python3 support.</p>

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6 changes: 3 additions & 3 deletions manual.html
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<p><a name="sec1"></a></p>
<h2>1 About rnaQUAST</h2>
<p>rnaQUAST is a tool for evaluating RNA-Seq assemblies using reference genome and gene database. In addition, rnaQUAST is also capable of estimating gene database coverage by raw reads and <em>de novo</em> quality assessment using third-party software.</p>
<p>rnaQUAST version 2.0.0 was released under GPLv2 on February 5th, 2020 and can be downloaded from <a href="http://cab.spbu.ru/software/rnaquast/" rel="nofollow">http://cab.spbu.ru/software/rnaquast/</a> or <a href="https://github.com/ablab/rnaquast/releases">https://github.com/ablab/rnaquast/releases</a>.</p>
<p>rnaQUAST version 2.0.0 was released under GPLv2 on February 8th, 2020 and can be downloaded from <a href="http://cab.spbu.ru/software/rnaquast/" rel="nofollow">http://cab.spbu.ru/software/rnaquast/</a> or <a href="https://github.com/ablab/rnaquast/releases">https://github.com/ablab/rnaquast/releases</a>.</p>
<p><strong>For impatient people:</strong></p>
<ul>
<li>
<p>You will need Python, <a href="https://pythonhosted.org/gffutils/installation.html" rel="nofollow">gffutils</a>, <a href="http://matplotlib.org/" rel="nofollow">matplotlib</a> and <a href="https://joblib.readthedocs.io/en/latest/" rel="nofollow">joblib</a>. Also you will need <a href="http://research-pub.gene.com/gmap/" rel="nofollow">GMAP</a> (or <a href="http://hgwdev.cse.ucsc.edu/~kent/exe/" rel="nofollow">BLAT</a>) and <a href="http://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/" rel="nofollow">BLASTN</a> installed on your machine and added to the <code>$PATH</code> variable.</p>
</li>
<li>
<p>You may also install rnaQUAST via conda</p>
<pre><code> conda install -c rnaquast -c bioconda rnaquast
<pre><code> conda install -c bioconda rnaquast
</code></pre>
</li>
<li>
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<p><a name="sec2.1"></a></p>
<h3>2.1 General requirements</h3>
<p>rnaQUAST can be installed via conda:</p>
<pre><code> conda install -c rnaquast -c bioconda rnaquast
<pre><code> conda install -c bioconda rnaquast
</code></pre>
<p>If you wish to run rnaQUAST from <a href="https://github.com/ablab/rnaquast/releases">the release archive</a> you need:</p>
<ul>
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