Open
Description
Description of bug
- wget https://github.com/ablab/spades/archive/refs/tags/continuous.tar.gz
- tar -xf continuous.tar.gz
- cd spades-continuous
- ./spades_compile.sh -j 64 -t
long-long-compiling skipped, but at last:
./spades_compile.sh: line 239: /Test.Bacteria/SPADES/spades-continuous/spades.py: No such file or directory
python3 --version: Python 3.10.13
python --version: Python 2.7.18
Ubuntu 22.04.5, kernel 6.8.0-49
It seems that build script tries to call spades from the current directory, not from the spades-continuous/bin, where it is located.
spades.log
./spades_compile.sh: line 239: /Test.Bacteria/SPADES/spades-continuous/spades.py: No such file or directory
params.txt
No run, so no params
SPAdes version
SPAdes 4.0.0-continuous
Operating System
Ubuntu 22.04.5
Python Version
3.10.13
Method of SPAdes installation
manual
No errors reported in spades.log
- Yes
Metadata
Assignees
Labels
No labels
Activity