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Issues list

spades-hammer error : OS return value: -6 io Input / output (e.g. due to disk storage) errors
#1402 opened Oct 28, 2024 by AmaliT
1 task done
1
spades-hammer finishing with abnormally, OS return value: -7 but with an (possibly) error message saying 'None' after 'writing down entries' io Input / output (e.g. due to disk storage) errors
#1400 opened Oct 25, 2024 by jfy133
1 task done
6
SPAdes is running abnormally, with some errors. io Input / output (e.g. due to disk storage) errors log Errors explained in the log file
#1385 opened Sep 27, 2024 by TAXICANI
1 task done
1
'Failed to limit memory to' error on Mac M3 Max, while SPAdes runs normally via a virtual Linux machine on the same computer. io Input / output (e.g. due to disk storage) errors
#1324 opened Jul 2, 2024 by mkazanov
1 task done
6
== Error == finished abnormally, OS return value: -11 io Input / output (e.g. due to disk storage) errors
#1277 opened Apr 16, 2024 by efe3506
1 task done
5
== Error == system call for: "['/usr/lib/spades/bin/spades-core', '/home/ifb/rnaSPAdemount/K55/configs/config.info', '/home/ifb/rnaSPAdemount/K55/configs/mda_mode.info', '/home/ifb/rnaSPAdemount/K55/configs/rna_mode.info']" finished abnormally, err code: -6 io Input / output (e.g. due to disk storage) errors
#1262 opened Mar 22, 2024 by adsas45
1 task done
1
Exception caught Cannot open file XXX/.bin_reads/paired_0.off': iostream error io Input / output (e.g. due to disk storage) errors
#1250 opened Feb 27, 2024 by gorfol
1 task done
6
Spades assembly outputing an empty file io Input / output (e.g. due to disk storage) errors
#1209 opened Nov 13, 2023 by MittelheiserL
1 task done
2
finished abnormally, OS return value: -6 io Input / output (e.g. due to disk storage) errors
#1089 opened Feb 22, 2023 by Riverfishstar
1 task done
2
finished abnormally, OS return value: -11 io Input / output (e.g. due to disk storage) errors
#1072 opened Jan 31, 2023 by Soumyadutta-basak
1 task done
7
Spades errors while trying to assemble low coverage genomes io Input / output (e.g. due to disk storage) errors
#1042 opened Nov 8, 2022 by SilAdSe
1 task done
2
ProTip! no:milestone will show everything without a milestone.