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Coding
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Coding
25 followers · 43 following

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Achievement: Pull Sharkx2Achievement: Pair ExtraordinaireAchievement: Quickdraw

Achievements

Achievement: Pull Sharkx2Achievement: Pair ExtraordinaireAchievement: Quickdraw

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adiezsanchez/README.md
  • 👋 Hi, I’m @adiezsanchez
  • 👀 I’m interested in bio-image analysis
  • 🌱 I’m currently studying Python and Deep learning applied to computer vision
  • Let's connect and explore the untapped possibilities within each pixel! 🧩✨
  • 📫 How to reach me: alberto.d.sanchez@ntnu.no

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  1. brain_tissue_nuc_segm brain_tissue_nuc_segm Public

    Segmentation of nuclear signals in fluorescently stained mouse brain tissue sections. Segmentations performed with a fine-tuned Stardist 3D model and/or Cellpose

    Jupyter Notebook 9 2

  2. YAP_nuclear_3D_orgs YAP_nuclear_3D_orgs Public

    3D Nuclear translocation study of YAP in Intestinal Organoids. Tool developed for the Martin-Alonso Regeneration lab.

    Jupyter Notebook 2

  3. saramorg_fret_nroot saramorg_fret_nroot Public

    Analysis of Arabidopsis Thaliana roots, FRET-ratio calculation in nuclei compartment. 3D reconstruction of root structure and automatic assignment of tissue layers. Tool developed for the Functiona…

    Python 1

  4. intestinal_organoid_yolov8 intestinal_organoid_yolov8 Public

    Tools to analyze intestinal organoid imaging at the Martin-Alonso/Oudhoff lab using AI

    Jupyter Notebook 3

  5. shreyag_ibd_orgs shreyag_ibd_orgs Public

    Analysis of colon organoids in 2D and 3D

    Jupyter Notebook

  6. bf_intorg_YOLOv8_dev bf_intorg_YOLOv8_dev Public

    Training workflow for a YOLOv8 segmentation model of brightfield intestinal organoids and spheroids (differentiated, undifferentiated, dead). Tool developed for the Martin-Alonso Regeneration lab.

    Jupyter Notebook 1