pixi.toml

[project]
name = "int_organoids"
channels = ["pytorch", "nvidia", "conda-forge"]
platforms = ["win-64"]

[dependencies]
python = "3.9.*"
pytorch = "==2.5.0"
pytorch-cuda = "12.1.*"
torchvision = "==0.20.0"
napari = "*"
numpy = "*"
pandas = "*"
tifffile = "*"
matplotlib = "*"
tqdm = "*"
scikit-image = "*"
plotly = "*"
pyclesperanto-prototype = "*"
napari-segment-blobs-and-things-with-membranes = "*"
apoc-backend = "*"
jupyterlab = "*"
ultralytics = "*"

[tasks]
lab = "jupyter lab"
fix-pillow = "python -m pip install --no-deps --force-reinstall pillow==9.2.0"
fix-opencv = "python -m pip install --no-deps --ignore-installed opencv-python==4.10.0.84"
postfix-windows-dll = { depends-on = ["fix-pillow", "fix-opencv"] }