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Adding list of indices and kwargs for ratio_plot

enhancementNew feature or requestNew feature or request

Status: Open.

#42 In ag-warscheid/autoprot;

· aretaon opened on May 22, 2024

·  

autoprot v0.3

VSN columns does not work with pandas index

enhancementNew feature or requestNew feature or request

Status: Open.

#41 In ag-warscheid/autoprot;

· aretaon opened on Apr 11, 2024

Merge function similar to Perseus Category based merging of datasets?

enhancementNew feature or requestNew feature or request

Status: Open.

#36 In ag-warscheid/autoprot;

· aretaon opened on Sep 4, 2023

adding thresh keyword to DIMA

enhancementNew feature or requestNew feature or request

Status: Open.

#34 In ag-warscheid/autoprot;

· aretaon opened on Sep 4, 2023

Sankey plots

enhancementNew feature or requestNew feature or request

Status: Open.

#26 In ag-warscheid/autoprot;

· aretaon opened on Sep 4, 2023

Make documentation for jupyterHub setup

documentationImprovements or additions to documentationImprovements or additions to documentation

enhancementNew feature or requestNew feature or request

Status: Open.

#25 In ag-warscheid/autoprot;

· aretaon opened on Sep 4, 2023

Matching p-sites in KSEA

enhancementNew feature or requestNew feature or request

Status: Open.

#21 In ag-warscheid/autoprot;

· aretaon opened on Sep 4, 2023

implement edgeR (alternative to limma)

enhancementNew feature or requestNew feature or request

Status: Open.

#15 In ag-warscheid/autoprot;

· aretaon opened on Sep 4, 2023

implement TMM normalization

enhancementNew feature or requestNew feature or request

Status: Open.

#14 In ag-warscheid/autoprot;

· aretaon opened on Sep 4, 2023

Categorical search and or organization of documentation

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#13 In ag-warscheid/autoprot;

· aretaon opened on Sep 4, 2023

Improve enrichment analysis for CPT or define values of interest

enhancementNew feature or requestNew feature or request

Status: Open.

#12 In ag-warscheid/autoprot;

· aretaon opened on Sep 4, 2023

Perform RankSum in Python

enhancementNew feature or requestNew feature or request

Status: Open.

#9 In ag-warscheid/autoprot;

· aretaon opened on Sep 4, 2023