DNA methylation microarray tutorial

Basic R script to analyse Illumina Infinium HumanMethylation450 BeadChip data

Requirements

source("http://bioconductor.org/biocLite.R")
biocLite()
biocLite('GEOquery')
biocLite('minfi')
biocLite('IlluminaHumanMethylation450kmanifest')
biocLite('ChAMP')
biocLite('limma')
biocLite('IlluminaHumanMethylation450k.db')