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Feature/physics_checkpointer #351

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@elynnwu elynnwu commented Oct 4, 2022 •
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Purpose

This PR extends checkpointers to Physics and glue code and enables driver tests for multistep checkpoints.

Code changes:

  • Provide a list of relevant code changes and the side effects they have on other code.

Checklist

Before submitting this PR, please make sure:

  • You have followed the coding standards guidelines established at Code Review Checklist.
  • Docstrings and type hints are added to new and updated routines, as appropriate
  • All relevant documentation has been updated or added (e.g. README, CONTRIBUTING docs)
  • For each public change and fix in pace-util, HISTORY has been updated
  • Unit tests are added or updated for non-stencil code changes

elynnwu and others added 30 commits August 30, 2022 11:18
@elynnwu
fix variable mismatch
beefed4
@elynnwu
reinitialize dycore to reset temp storages
7ad0486
@elynnwu
Merge branch 'main' into fix/checkpointer-validation
e873534
@elynnwu
Merge branch 'main' into fix/checkpointer-validation
8119251
@elynnwu
fix var name
6788d77
@elynnwu
fvdynamics-out tracers in compute domain only
70c044e
@elynnwu
update data version
deef15c
@elynnwu
revert comment
2c0fbdc
@elynnwu
fix driver subset
f91c22e
@elynnwu
clean up translate test
534a887
@elynnwu
Merge branch 'main' into fix/checkpointer-validation
ab5992f
@elynnwu
add comment
9154218
@elynnwu
Merge branch 'main' into current
5842e3e
@elynnwu
Bump to 8.1.3
3a33976
@elynnwu
add physics and driver savepoint tests
cd8907b
@elynnwu
specify experiement name
36573ac
@elynnwu
add python version to caching
e0beac8
@elynnwu
separate test, increase threshold for circleci
7dbb1b9
@elynnwu
update test names
ef9a475
@elynnwu
update config
889e19f
@mcgibbon
add first attempt at unified savepoints target
04cc70a
@mcgibbon
Merge branch 'feature/add-circleci-physics-driver-test' of github.com…
52d89ad 
…:ai2cm/pace into feature/add-circleci-physics-driver-test
@mcgibbon
attempt to put most of the test logic in a command
89df5ce
@mcgibbon
fix config to validate
e36a10a
@mcgibbon
fix test_driver, lint, and dycore_savepoints_mpi
343a1c2
@mcgibbon
add remaining circleci plans
74d0e1d
@mcgibbon
activate venv correctly in driver test
1941476
@mcgibbon
use independent keys for gt caching
0ead115
@mcgibbon
downgrade serial savepoint tests to medium resource type
c6011ca
@elynnwu
add h5netcdf to requirement
3e9d080
mcgibbon and others added 25 commits September 19, 2022 23:42
@mcgibbon
Merge branch 'main' into feature/checkpointer_circleci
516f60f
@mcgibbon
run the 54rank test on an xlarge worker
c79eec4
@mcgibbon
delete duplicated test definitions
f96cb35
@mcgibbon
fix path for savepoint tests
e0e6e79
@mcgibbon
move directory to match moved path in last commit
6f88f0b
@mcgibbon
remove driver 54rank compiled test from CircleCI
4becd03
@mcgibbon
increase driver_savepoints_mpi resource type to xlarge
8589707
@mcgibbon
Merge branch 'main' into feature/checkpointer_circleci
19fbcf1
@mcgibbon
checkpointer test works with remapping and tracer advection
fcecc1a
@mcgibbon
Merge branch 'main' into feature/checkpointer_circleci
92bb68e
@elynnwu
Merge branch 'main' into feature/checkpointer_circleci
bdda2bf
@elynnwu
physics checkpointer init
5c59895
@elynnwu
update phys and driver out
5ea06df
@elynnwu
physics checkpoint working for 1 step
538d943
@elynnwu
physics checkpoint working
ddea611
@elynnwu
2 step driver threshold
19b9944
@elynnwu
Merge branch 'main' into feature/physics_checkpointer
61a24c5
@elynnwu
delete unused checkpoint
480a16a
@elynnwu
lint
90c26d9
@elynnwu
Merge branch 'feature/physics_checkpointer'
b394f02
@elynnwu
resolve circular dependency
4c85dea
@elynnwu
Merge branch 'feature/physics_checkpointer' of github.com:ai2cm/pace …
62d48b5 
…into feature/physics_checkpointer
@elynnwu
lint on the right python version
9fdd382
@elynnwu
Merge branch 'main' into feature/physics_checkpointer
3a379ba
@elynnwu
remove unchecked variable
87f5115
@elynnwu elynnwu marked this pull request as ready for review October 11, 2022 21:46
Base automatically changed from feature/checkpointer_circleci to main October 18, 2022 22:29
@FlorianDeconinck FlorianDeconinck added the blocked Blocked by another PR / feature label Dec 7, 2022
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4 participants

@elynnwu @FlorianDeconinck @mcgibbon