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al2na / methylKit Public

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Refactor_loading_tabix#311

Draft

alexg9010 wants to merge 10 commits intomasteral2na/methylKit:masterfrom

refactor_loading_tabixal2na/methylKit:refactor_loading_tabixCopy head branch name to clipboard

Conversation Commits10 (10)Checks Files changed

Draft

Refactor_loading_tabix#311
alexg9010 wants to merge 10 commits intomasterfrom
refactor_loading_tabix

Commits

Commits on Jan 18, 2024

add more failing tests for loading of tabix
alexg9010
committed
extract tabix indexing into separate function
alexg9010
committed
refactor function readTabixHeader into parseTabixHeader
alexg9010
committed
rename function checkTabixHeader into readTabixHeader
alexg9010
committed
introduce new function checkTabixFile
alexg9010
committed
update vignette to use new
alexg9010
committed
update readMethylDB to use new functions
alexg9010
committed
refactor and update readMethylDiffDB
alexg9010
committed
refactor and update readMethylBaseDB
alexg9010
committed
refactor and update readMethylRawDB
alexg9010
committed

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