SAFFARI is designed to implement Snakemake and run 4 different fine-mapping methods (SuSiE, FINEMAP, PolyFun+SuSiE, PolyFun+FINEMAP). Please check the WiKi page for more details.
Manuscript has been submitted for publication in Nature Neuroscience.
If you end up using this pipeline, please make sure to acknowledge the flagship papers of the softwares implemented:
And also the current repository. A link to the accompanying manuscript will be posted soon.