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@aomlomics

AOML 'Omics

Official GitHub organization of the AOML 'Omics program. AOML is a federal research laboratory of the National Oceanic and Atmospheric Administration (NOAA).

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  1. datasets datasets Public

    List of datasets generated by the AOML 'Omics program

    HTML 1

  2. edna2obis edna2obis Public

    Forked from iobis/dataset-edna

    Code to convert eDNA metabarcoding data to Darwin Core for OBIS

    Jupyter Notebook 6 1

Repositories

Showing 10 of 31 repositories
  • sase Public
    aomlomics/sase’s past year of commit activity
    C++ 0 CC-BY-4.0 0 0 0 Updated Feb 18, 2025
  • gomecc Public

    Input files and data analysis for NOAA GOMECC-4 DNA project.

    aomlomics/gomecc’s past year of commit activity
    HTML 0 1 0 0 Updated Feb 18, 2025
  • protocols Public

    Protocols used by AOML Omics labs, following the BeBOP-OBON standard

    aomlomics/protocols’s past year of commit activity
    Shell 1 CC0-1.0 2 7 0 Updated Feb 18, 2025
  • node Public
    aomlomics/node’s past year of commit activity
    TypeScript 1 0 2 1 Updated Feb 18, 2025
  • datasets Public

    List of datasets generated by the AOML 'Omics program

    aomlomics/datasets’s past year of commit activity
    HTML 1 0 0 0 Updated Feb 18, 2025
  • edna2obis Public Forked from iobis/dataset-edna

    Code to convert eDNA metabarcoding data to Darwin Core for OBIS

    aomlomics/edna2obis’s past year of commit activity
    Jupyter Notebook 6 MIT 3 4 0 Updated Feb 18, 2025
  • tourmaline Public

    Amplicon sequence processing workflow using QIIME 2 and Snakemake

    aomlomics/tourmaline’s past year of commit activity
    Python 45 BSD-3-Clause 20 45 0 Updated Feb 18, 2025
  • protocol_extract_dna_sedtrap_powersoil Public

    Protocol for extracting DNA from sediment trap samples using the Qiagen PowerSoil Pro Kit

    aomlomics/protocol_extract_dna_sedtrap_powersoil’s past year of commit activity
    0 0 0 0 Updated Feb 12, 2025
  • protocol_pcr_ssu18sv9_emp Public

    Protocol for preparing 18S V9 (EMP) libraries for Michigan State RTSF

    aomlomics/protocol_pcr_ssu18sv9_emp’s past year of commit activity
    0 0 0 0 Updated Feb 12, 2025
  • protocol_pcr_ssu16sv4v5_emp Public

    Protocol for preparing 16S V4-V5 (EMP) libraries for Michigan State RTSF

    aomlomics/protocol_pcr_ssu16sv4v5_emp’s past year of commit activity
    0 0 0 0 Updated Feb 12, 2025
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