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Initial fixes to bring denoiser back into working order. - #27

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danlurie wants to merge 19 commits into
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Initial fixes to bring denoiser back into working order.#27
danlurie wants to merge 19 commits into
arielletambini:masterfrom
danlurie:master

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@danlurie

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  • plot_carpet now lives in a dedicated plotting.py file
  • The main denoise function has been moved to denoiser.py for ease of importing
  • run_denoise.py has been streamlined.
  • Fixed the logic for identifying the FD column and added an option to specify the FD column name.

@arielletambini arielletambini left a comment

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Thanks! Please add a smoke test to https://github.com/arielletambini/denoiser/blob/master/.circleci/config.yml showcasing the --bids flag.

Comment thread run_denoise.py Outdated
Comment thread run_denoise.py Outdated
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