Releases: bacpop/PopPUNK
Releases · bacpop/PopPUNK
v.2.7.8
PopPUNK v2.7.7
Contributors
johnlees and anleip
Assets 2
PopPUNK v2.7.6
Contributors
johnlees
Assets 2
v2.7.5
Fixes to lineage models using --count-unique-distances.
v2.7.4
More efficient visualisation of large datasets through improvements to the mandrake interface and assignment with partial query graphs.
v2.7.2
PopPUNK v2.7.1
Note this release fixes the TypeError: Population must be a sequence. For dicts or sets, use sorted(d). error
What's Changed
- Update from master by @nickjcroucher in #288
- Update graph summary processes by @nickjcroucher in #303
- Update from master branch by @nickjcroucher in #312
- Fix External Clusters csv being duplicated by @absternator in #324
- Small fixes to database pruning and updating by @nickjcroucher in #328
- Update plotting and network summary statistics by @nickjcroucher in #304
- Enable assignment & visualisation with partial query graphs by @nickjcroucher in #332
Full Changelog: v2.7.0...v2.7.1
Contributors
nickjcroucher and absternator
Assets 2
PopPUNK v2.7.0
Main additions are to remove the need for distance matrices (.dists.npy) in query assignment, and a formal stable nomenclature mode with --stable.
What's Changed
- Docs update by @samhorsfield96 in #318
- Replaced deprecated 'rU' with 'r' to make this work on recent python by @tgttunstall in #319
- PopPUNK 2.7.0 candidate by @johnlees in #320
New Contributors
- @tgttunstall made their first contribution in #319
Full Changelog: v2.6.7...v2.7.0
Contributors
johnlees, tgttunstall, and samhorsfield96
Assets 2
PopPUNK v2.6.7
What's Changed
- Move call of sketchlibAssemblyQC in query assign by @absternator in #317
Full Changelog: v2.6.6...v2.6.7
Contributors
absternator
Assets 2
PopPUNK v2.6.6
Add more QC fail reporting for beebop
What's Changed
- Update cluster assign to write qcreport on qc failiures by @absternator in #315
New Contributors
- @absternator made their first contribution in #315
Full Changelog: v2.6.5...v2.6.6
Contributors
absternator