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bcbio / singlecell-reports Public template

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converted qmd from cellchat#22

Open

lijin0303 wants to merge 22 commits intomainbcbio/singlecell-reports:mainfrom

cellchat_qmdbcbio/singlecell-reports:cellchat_qmdCopy head branch name to clipboard

Conversation Commits22 (22)Checks Files changed

Open

converted qmd from cellchat#22
lijin0303 wants to merge 22 commits intomainfrom
cellchat_qmd

Commits

Commits on Aug 5, 2025

converted qmd from cellchat
lijin0303
authored

Commits on Aug 26, 2025

updated converted cellchat qmd
lijin0303
authored
Style code (GHA)
lijin0303
committed
cellchat qmd action
lijin0303
authored
Update system dependencies and Quarto setup
lijin0303
authored
Add deployment step for cellchat.html
lijin0303
authored

Commits on Aug 28, 2025

Update workflow to install Quarto via conda
lijin0303
authored
Simplify directory change in workflow script
lijin0303
authored
Clean up CellChat analysis code and visualizations
lijin0303
authored
Remove panel-tabset wrapper from top interactions
lijin0303
authored
Remove panel tabset from R code chunk
lijin0303
authored
Add panel tabset option to R code chunk
lijin0303
authored
Add installation step for presto package
lijin0303
authored
Change installation method for presto to devtools
lijin0303
authored
Add installation step for presto package in workflow
lijin0303
authored
Update presto installation command in workflow
lijin0303
authored

Commits on Aug 29, 2025

Fix formatting in run_cellchat.yml for GitHub Actions
lijin0303
authored
Update presto installation method in workflow
lijin0303
authored
Change output format for cellchat rendering
lijin0303
authored
Merge branch 'main' into cellchat_qmd
lpantano
committed
trying to trigger new rendering
lpantano
committed
Style code (GHA)
lpantano
committed

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