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Improve hairpin/palindrome removal in long-read assembly #55

@kmnip

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@kmnip

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  • version of RNA-Bloom with java -jar RNA-Bloom.jar -version
    2.0.1
  • version of java with java -version
    20
  • exact command used to run RNA-Bloom
    rnabloom -long reads.fastq.gz

Currently, hairpins are still kept if there are read support. The default behavior needs to be more aggressive.

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