Skip to content
@bcgsc

BC Cancer Canada's Michael Smith Genome Sciences Centre

Sequencing Centre for Genomics and Bioinformatics Research

Pinned Loading

  1. RNA-Bloom RNA-Bloom Public

    🌺 reference-free transcriptome assembly for short and long reads

    Java 93 7

  2. LongStitch LongStitch Public

    Correct and scaffold assemblies using long reads

    Makefile 45 7

  3. ntRoot ntRoot Public

    🌳 Human ancestry inference from genomic data

    Python 4

  4. btllib btllib Public

    Bioinformatics Technology Lab common code library

    C++ 22 5

  5. ntEdit ntEdit Public

    ✏️ Genome assembly polishing & SNV detection

    C++ 64 9

  6. goldrush goldrush Public

    Linear-time de novo Long Read Assembler

    C++ 34 2

Repositories

Showing 10 of 115 repositories
  • btllib Public

    Bioinformatics Technology Lab common code library

    bcgsc/btllib’s past year of commit activity
    C++ 22 5 24 (1 issue needs help) 4 Updated Oct 5, 2024
  • pori_ipr_client Public

    Integrated Pipeline Reports (IPR) client. The web interface for the reporting application as part of PORI

    bcgsc/pori_ipr_client’s past year of commit activity
    TypeScript 8 GPL-3.0 1 0 1 Updated Oct 4, 2024
  • pori_ipr_api Public

    Integrated Pipeline Reports (IPR) API, the reporting API as part of the PORI platform

    bcgsc/pori_ipr_api’s past year of commit activity
    JavaScript 8 0 0 3 Updated Oct 4, 2024
  • abyss Public

    🔬 Assemble large genomes using short reads

    bcgsc/abyss’s past year of commit activity
    C++ 308 107 4 0 Updated Oct 3, 2024
  • NanoSim Public

    Nanopore sequence read simulator

    bcgsc/NanoSim’s past year of commit activity
    Python 233 56 29 (7 issues need help) 2 Updated Oct 3, 2024
  • btl Public

    🔬 Bioinformatics Technology Lab, Genome Sciences Centre

    bcgsc/btl’s past year of commit activity
    HTML 1 3 4 0 Updated Oct 3, 2024
  • ntSynt Public

    Detecting multi-genome synteny using minimizer graph mapping

    bcgsc/ntSynt’s past year of commit activity
    Python 68 GPL-3.0 1 0 0 Updated Oct 3, 2024
  • goldrush Public

    Linear-time de novo Long Read Assembler

    bcgsc/goldrush’s past year of commit activity
    C++ 34 GPL-3.0 2 6 0 Updated Oct 3, 2024
  • mtGrasp Public

    mtGrasp: de novo reference-grade mitochondrial genome assembly and standardization

    bcgsc/mtGrasp’s past year of commit activity
    Python 10 GPL-3.0 2 1 0 Updated Oct 3, 2024
  • arcs Public

    🌈Scaffold genome sequence assemblies using linked or long read sequencing data

    bcgsc/arcs’s past year of commit activity
    C++ 91 GPL-3.0 16 0 0 Updated Oct 2, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…