ntsynt test does not match expected results in conda env

[sosie101]

Hello, I installed ntsynt in a conda environment (loading miniconda3 first) using the command: conda install -c bioconda -c conda-forge ntsynt. I used git clone on this repo and ran run_ntSynt_demo.sh from the tests/ folder. The resulting .mx.dot files are different from expected_result/.mx.dot, the run created *common.bf files that are not in expected_result/, but the *.tsv files are the same. Is my installation okay?

[lcoombe]

Hi @sosie101,

If the *.tsv files are the same (ie. the final synteny block coordinates), yes your installation is fine. The dot files could differ just due to the order that the lines are printed out, and we did not include the *.bf files in the repo to avoid uploading larger files.

Thank you for your interest in ntSynt!
Lauren