Feat: Adjust Editable Tumour Summary Edit Fields

- DEVSU-2201
- Remove comparator analysis role field and related CSS
- Hardcode primary as the default comparator analysis role for new mutation burden data

Author: bnguyen-bcgsc

app/components/TumourSummaryEdit/index.scss

@@ -6,8 +6,4 @@
   &__text-field {
     margin: 12px 0;
   }
-
-  &__drop-down {
-    margin: 12px 0;
-  }
 }

app/components/TumourSummaryEdit/index.tsx

@@ -10,8 +10,6 @@ import {
   Button,
   Chip,
   Autocomplete,
-  Select,
-  MenuItem,
 } from '@mui/material';
 import cloneDeep from 'lodash/cloneDeep';
 import api, { ApiCallSet } from '@/services/api';
@@ -150,6 +148,7 @@ const TumourSummaryEdit = ({
         if (mutationBurden?.ident) {
           apiCalls.push(api.put(`/reports/${report.ident}/mutation-burden/${mutationBurden.ident}`, newMutationBurdenData, {}));
         } else {
+          newMutationBurdenData.role = 'primary'; // Default role of new mutation burden data for reports with no existing analysis per ClinInfo team
           apiCalls.push(api.post(`/reports/${report.ident}/mutation-burden`, newMutationBurdenData, {}));
         }
       } else {
@@ -332,22 +331,6 @@ const TumourSummaryEdit = ({
     if (newMutationBurdenData) {
       return (
         <>
-          <TextField
-            className="tumour-dialog__drop-down"
-            label="Mutation Analysis Role"
-            value={newMutationBurdenData.role}
-            name="role"
-            onChange={handleMutationBurdenChange}
-            variant="outlined"
-            select
-            fullWidth
-          >
-            <MenuItem value={null}>-Select Role-</MenuItem>
-            <MenuItem value={'primary'}>Primary</MenuItem>
-            <MenuItem value={'secondary'}>Secondary</MenuItem>
-            <MenuItem value={'tertiary'}>Tertiary</MenuItem>
-            <MenuItem value={'quarternary'}>Quarternary</MenuItem>
-          </TextField>
           <TextField
             className="tumour-dialog__text-field"
             label="Mutation Burden (Mut/Mb)"
@@ -383,22 +366,6 @@ const TumourSummaryEdit = ({
     }
     return (
       <>
-        <TextField
-          className="tumour-dialog__drop-down"
-          label="Mutation Analysis Role"
-          value={null}
-          name="role"
-          onChange={handleMutationBurdenChange}
-          variant="outlined"
-          select
-          fullWidth
-        >
-          <MenuItem value={null}>-Select Role-</MenuItem>
-          <MenuItem value={'primary'}>Primary</MenuItem>
-          <MenuItem value={'secondary'}>Secondary</MenuItem>
-          <MenuItem value={'tertiary'}>Tertiary</MenuItem>
-          <MenuItem value={'quarternary'}>Quarternary</MenuItem>
-        </TextField>
         <TextField
           className="tumour-dialog__text-field"
           label="Mutation Burden (Mut/Mb)"

app/views/ReportView/components/RapidSummary/index.tsx

@@ -193,10 +193,9 @@ const RapidSummary = ({
             const burdenResp = await api.get(`/reports/${report.ident}/mutation-burden`).request();
             if (burdenResp[0].qualitySvCount == null) {
               setPrimaryBurden(null);
-              console.log(burdenResp[0]);
             } else {
               setPrimaryBurden(burdenResp[0]);
-              console.log(burdenResp[0]);
+              console.log(burdenResp[0]); // For debug purpose
             }
           } catch (e) {
             // mutation burden does not exist in records before this implementation, and no backfill will be done on the backend, silent fail this