Synapse DCC Utilities

Code for managing data coordinating operations (e.g., development of the CSBC/PS-ON Knowledge Portal and individual Center pages) for Sage-supported communities through Synapse. Currently this package is able to:

• Build tables and charts to summarize annotations from a view
• Build a DCC dashboard to summarize multiple projects
• Provide tools/scripts to handle metadata management (e.g to/from GEO)
• Pull publications from PubMed
• Build projects
• Invite members to a team

What to see examples? Go to config/targets.md

Getting Started

There are a few ideas to get started using this package

Building visualizations from a file view

Here we can use a file view with annotations to create multiple charts of visualizations

Summarizing projects by dashboard

Here we can summarize activity by project, date added, data type, etc.