v0.2.6

What's Changed

• Add z-profile horizontal vs. vertical split. by @jonathanoesterle in #14
• and upgraded deps to clear the Dependabot nagging

New Contributors

• @jonathanoesterle made their first contribution in #14

Full Changelog: v0.2.5...v0.2.6

v0.2.5

What's Changed

• Unwarper by @huangziwei in #12

Full Changelog: v0.2.4...v0.2.5

v0.2.4

Minor update to make compatible with skeliner==0.2.3.

Full Changelog: v0.2.3...v0.2.4

v0.2.3

What's Changed

• v0.2.3: bug fix by @huangziwei in #11

Full Changelog: v0.2.2...v0.2.3

v0.2.2: volume-based xyz profiles

What's Changed

• v0.2.2: add "volume" as a measure for xyz profiles by @huangziwei in #10

Breaking changes

The z_profile and xy_profile in the warped skeleton (skel.extra) now become z_profiles and xy_profiles.

To be more specific, the original skel.extra["z_profile"] and skel.extra["xy_profile"] are now skel.extra["z_profiles"]["length"] and skel.extra["xy_profiles"]["length"], and there are new skel.extra["z_profiles"]["volume"] and skel.extra["xy_profiles"]["volume"].

Full Changelog: v0.2.1...v0.2.2

v0.2.1

What's Changed

• HDR (high density region) for stratification profile by @huangziwei in #9

Full Changelog: v0.2.0...v0.2.1

v0.2.0

We've accumulated enough breaking changes away from the original MATLAB version to justify a v0.2.0:

• in PR #6, we extracted the core warping logic out of warp_arbor() (now warp_skeleton() from #8) as warp_nodes(), allowing us to add warp_mesh() to flatten the mesh also. normalize_nodes() is separated from get_zprofile().
• in RP #7, we refactored conformal_map_indep_fixed_diagonals() to warp coordinates with larger/global surface mapping (#7), instead of confining it with the current cell boundaries; and defaulted the codebase to use 0-based indexing instead of MATLAB's 1-based one, unless you turn the backward_compatible flag to True in some places.
• in RP #8, we tidied up the APIs, renamed arbor.py to warpers.py, all warp_*() functions and the high level Warper class now live in it.

Full Changelog: v0.1.10...v0.2.0

v0.1.10

Main: changed license to GPL-3.

Minor: small enhancements here and there.

Full Changelog: v0.1.9...v0.1.10

v0.1.9

What's Changed

• Warp any coordinates within bounds by @huangziwei in #6
• Global mapping by @huangziwei in #7

Full Changelog: v0.1.8...v0.1.9

v0.1.8

Full Changelog: v0.1.7...v0.1.8