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Releases: bergmanlab/mcclintock

v.2.0.0

17 Sep 13:29
93369ef

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  • McClintock completely re-written into a snakemake-based pipeline
  • Expanded the available TE detection methods
  • Expanded the output files to include VCF, and HTML summary report

v1.0.0

17 Sep 13:27

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  • Minor bug fixes in installation and coverage coordinate system
  • Last version of original McClintock system described in Nelson et al (2017)

v0.2

05 Aug 17:49

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  • Add coverage module to calculate and plot depth of coverage for all TE families.
  • Use conda for environment dependencies.

v0.1

10 Apr 14:53

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One last PoPoolationTE fix