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Data fixes: alkaphilic label spelling (#470) + NaCl delta high range bound (#471) #477

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Data fixes: alkaphilic label spelling (#470) + NaCl delta high range bound (#471) #477

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8 changes: 4 additions & 4 deletions metpo-base.json
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Original file line number Diff line number Diff line change
Expand Up @@ -14483,7 +14483,7 @@
"pred" : "http://qudt.org/schema/qudt/ucumCode",
"val" : "%"
}, {
"pred" : "https://w3id.org/metpo/range_max",
"pred" : "https://w3id.org/metpo/range_min",
"val" : "8"
} ]
}
Expand Down Expand Up @@ -21321,7 +21321,7 @@
}
}, {
"id" : "https://w3id.org/metpo/1003002",
"lbl" : "alkaphilic",
"lbl" : "alkaliphilic",
"type" : "CLASS",
"meta" : {
"definition" : {
Expand Down Expand Up @@ -21404,7 +21404,7 @@
}
}, {
"id" : "https://w3id.org/metpo/1003004",
"lbl" : "obligately alkaphilic",
"lbl" : "obligately alkaliphilic",
"type" : "CLASS",
"meta" : {
"definition" : {
Expand Down Expand Up @@ -21445,7 +21445,7 @@
}
}, {
"id" : "https://w3id.org/metpo/1003005",
"lbl" : "facultatively alkaphilic",
"lbl" : "facultatively alkaliphilic",
"type" : "CLASS",
"meta" : {
"definition" : {
Expand Down
8 changes: 4 additions & 4 deletions metpo-base.obo
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Original file line number Diff line number Diff line change
Expand Up @@ -7539,7 +7539,7 @@ id: metpo:1000482
name: NaCl delta high
synonym: "Nad_>8" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"}
is_a: metpo:1000335 ! NaCl delta
property_value: metpo:range_max "8" xsd:string
property_value: metpo:range_min "8" xsd:string
property_value: qudt:ucumCode "%" xsd:string

[Term]
Expand Down Expand Up @@ -9927,7 +9927,7 @@ property_value: IAO:0000117 "Anthea Guo" xsd:string

[Term]
id: metpo:1003002
name: alkaphilic
name: alkaliphilic
def: "A pH growth preference in which an organism grows optimally at pH values above 9." [] {IAO:0000119="OMP:0005009", IAO:0000119="MICRO:0001549", IAO:0000119="OMP:0005010", IAO:0000119="ENVO:00002022", IAO:0000119="OMP:0005011"}
synonym: "alkaliphile" EXACT []
synonym: "alkaliphilic" EXACT []
Expand All @@ -9946,7 +9946,7 @@ is_a: metpo:1003000 ! pH growth preference

[Term]
id: metpo:1003004
name: obligately alkaphilic
name: obligately alkaliphilic
def: "A pH growth preference in which an organism requires alkaline conditions (typically pH above 8.5) for growth and cannot grow at neutral or acidic pH." [] {IAO:0000119="OMP:0007947", IAO:0000119="ENVO:00002022", IAO:0000119="MICRO:0001565", IAO:0000119="OMP:0005011", IAO:0000119="OMP:0007771"}
synonym: "obligate alkaliphile" EXACT []
synonym: "obligate alkaphilic" EXACT []
Expand All @@ -9956,7 +9956,7 @@ property_value: IAO:0000117 "Luke Wang" xsd:string

[Term]
id: metpo:1003005
name: facultatively alkaphilic
name: facultatively alkaliphilic
def: "A pH growth preference in which an organism can grow at alkaline pH but does not require it." [] {IAO:0000119="MICRO:0001558", IAO:0000119="OMP:0005009", IAO:0000119="OMP:0007947", IAO:0000119="OMP:0005011", IAO:0000119="OMP:0007771"}
synonym: "facultative alkaliphile" EXACT []
synonym: "facultative alkaphilic" EXACT []
Expand Down
8 changes: 4 additions & 4 deletions metpo-base.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -15539,7 +15539,7 @@
<qudt:ucumCode>%</qudt:ucumCode>
<oboInOwl:hasRelatedSynonym>Nad_&gt;8</oboInOwl:hasRelatedSynonym>
<rdfs:label>NaCl delta high</rdfs:label>
<metpo:range_max>8</metpo:range_max>
<metpo:range_min>8</metpo:range_min>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1000482"/>
Expand Down Expand Up @@ -21461,7 +21461,7 @@
<oboInOwl:hasExactSynonym>alkaliphilic</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>alkalophile</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>alkalophilic</oboInOwl:hasExactSynonym>
<rdfs:label>alkaphilic</rdfs:label>
<rdfs:label>alkaliphilic</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1003002"/>
Expand Down Expand Up @@ -21514,7 +21514,7 @@
<oboInOwl:hasExactSynonym>obligate alkaliphile</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>obligate alkaphilic</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>obligately alkaliphilic</oboInOwl:hasExactSynonym>
<rdfs:label>obligately alkaphilic</rdfs:label>
<rdfs:label>obligately alkaliphilic</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1003004"/>
Expand All @@ -21537,7 +21537,7 @@
<oboInOwl:hasExactSynonym>facultative alkaliphile</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>facultative alkaphilic</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>facultatively alkaliphilic</oboInOwl:hasExactSynonym>
<rdfs:label>facultatively alkaphilic</rdfs:label>
<rdfs:label>facultatively alkaliphilic</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1003005"/>
Expand Down
8 changes: 4 additions & 4 deletions metpo-full.json
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Original file line number Diff line number Diff line change
Expand Up @@ -14481,7 +14481,7 @@
"pred" : "http://qudt.org/schema/qudt/ucumCode",
"val" : "%"
}, {
"pred" : "https://w3id.org/metpo/range_max",
"pred" : "https://w3id.org/metpo/range_min",
"val" : "8"
} ]
}
Expand Down Expand Up @@ -21319,7 +21319,7 @@
}
}, {
"id" : "https://w3id.org/metpo/1003002",
"lbl" : "alkaphilic",
"lbl" : "alkaliphilic",
"type" : "CLASS",
"meta" : {
"definition" : {
Expand Down Expand Up @@ -21402,7 +21402,7 @@
}
}, {
"id" : "https://w3id.org/metpo/1003004",
"lbl" : "obligately alkaphilic",
"lbl" : "obligately alkaliphilic",
"type" : "CLASS",
"meta" : {
"definition" : {
Expand Down Expand Up @@ -21443,7 +21443,7 @@
}
}, {
"id" : "https://w3id.org/metpo/1003005",
"lbl" : "facultatively alkaphilic",
"lbl" : "facultatively alkaliphilic",
"type" : "CLASS",
"meta" : {
"definition" : {
Expand Down
8 changes: 4 additions & 4 deletions metpo-full.obo
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Original file line number Diff line number Diff line change
Expand Up @@ -7538,7 +7538,7 @@ id: metpo:1000482
name: NaCl delta high
synonym: "Nad_>8" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"}
is_a: metpo:1000335 ! NaCl delta
property_value: metpo:range_max "8" xsd:string
property_value: metpo:range_min "8" xsd:string
property_value: qudt:ucumCode "%" xsd:string

[Term]
Expand Down Expand Up @@ -9926,7 +9926,7 @@ property_value: IAO:0000117 "Anthea Guo" xsd:string

[Term]
id: metpo:1003002
name: alkaphilic
name: alkaliphilic
def: "A pH growth preference in which an organism grows optimally at pH values above 9." [] {IAO:0000119="OMP:0005009", IAO:0000119="MICRO:0001549", IAO:0000119="OMP:0005010", IAO:0000119="ENVO:00002022", IAO:0000119="OMP:0005011"}
synonym: "alkaliphile" EXACT []
synonym: "alkaliphilic" EXACT []
Expand All @@ -9945,7 +9945,7 @@ is_a: metpo:1003000 ! pH growth preference

[Term]
id: metpo:1003004
name: obligately alkaphilic
name: obligately alkaliphilic
def: "A pH growth preference in which an organism requires alkaline conditions (typically pH above 8.5) for growth and cannot grow at neutral or acidic pH." [] {IAO:0000119="OMP:0007947", IAO:0000119="ENVO:00002022", IAO:0000119="MICRO:0001565", IAO:0000119="OMP:0005011", IAO:0000119="OMP:0007771"}
synonym: "obligate alkaliphile" EXACT []
synonym: "obligate alkaphilic" EXACT []
Expand All @@ -9955,7 +9955,7 @@ property_value: IAO:0000117 "Luke Wang" xsd:string

[Term]
id: metpo:1003005
name: facultatively alkaphilic
name: facultatively alkaliphilic
def: "A pH growth preference in which an organism can grow at alkaline pH but does not require it." [] {IAO:0000119="MICRO:0001558", IAO:0000119="OMP:0005009", IAO:0000119="OMP:0007947", IAO:0000119="OMP:0005011", IAO:0000119="OMP:0007771"}
synonym: "facultative alkaliphile" EXACT []
synonym: "facultative alkaphilic" EXACT []
Expand Down
8 changes: 4 additions & 4 deletions metpo-full.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -15549,7 +15549,7 @@
<qudt:ucumCode>%</qudt:ucumCode>
<oboInOwl:hasRelatedSynonym>Nad_&gt;8</oboInOwl:hasRelatedSynonym>
<rdfs:label>NaCl delta high</rdfs:label>
<metpo:range_max>8</metpo:range_max>
<metpo:range_min>8</metpo:range_min>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1000482"/>
Expand Down Expand Up @@ -21471,7 +21471,7 @@
<oboInOwl:hasExactSynonym>alkaliphilic</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>alkalophile</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>alkalophilic</oboInOwl:hasExactSynonym>
<rdfs:label>alkaphilic</rdfs:label>
<rdfs:label>alkaliphilic</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1003002"/>
Expand Down Expand Up @@ -21524,7 +21524,7 @@
<oboInOwl:hasExactSynonym>obligate alkaliphile</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>obligate alkaphilic</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>obligately alkaliphilic</oboInOwl:hasExactSynonym>
<rdfs:label>obligately alkaphilic</rdfs:label>
<rdfs:label>obligately alkaliphilic</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1003004"/>
Expand All @@ -21547,7 +21547,7 @@
<oboInOwl:hasExactSynonym>facultative alkaliphile</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>facultative alkaphilic</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>facultatively alkaliphilic</oboInOwl:hasExactSynonym>
<rdfs:label>facultatively alkaphilic</rdfs:label>
<rdfs:label>facultatively alkaliphilic</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1003005"/>
Expand Down
8 changes: 4 additions & 4 deletions metpo.json
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Original file line number Diff line number Diff line change
Expand Up @@ -14481,7 +14481,7 @@
"pred" : "http://qudt.org/schema/qudt/ucumCode",
"val" : "%"
}, {
"pred" : "https://w3id.org/metpo/range_max",
"pred" : "https://w3id.org/metpo/range_min",
"val" : "8"
} ]
}
Expand Down Expand Up @@ -21319,7 +21319,7 @@
}
}, {
"id" : "https://w3id.org/metpo/1003002",
"lbl" : "alkaphilic",
"lbl" : "alkaliphilic",
"type" : "CLASS",
"meta" : {
"definition" : {
Expand Down Expand Up @@ -21402,7 +21402,7 @@
}
}, {
"id" : "https://w3id.org/metpo/1003004",
"lbl" : "obligately alkaphilic",
"lbl" : "obligately alkaliphilic",
"type" : "CLASS",
"meta" : {
"definition" : {
Expand Down Expand Up @@ -21443,7 +21443,7 @@
}
}, {
"id" : "https://w3id.org/metpo/1003005",
"lbl" : "facultatively alkaphilic",
"lbl" : "facultatively alkaliphilic",
"type" : "CLASS",
"meta" : {
"definition" : {
Expand Down
8 changes: 4 additions & 4 deletions metpo.obo
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Original file line number Diff line number Diff line change
Expand Up @@ -7538,7 +7538,7 @@ id: metpo:1000482
name: NaCl delta high
synonym: "Nad_>8" RELATED [] {IAO:0000119="https://ordar.otelo.univ-lorraine.fr/files/ORDAR-53/BactoTraits_databaseV2_Jun2022.csv"}
is_a: metpo:1000335 ! NaCl delta
property_value: metpo:range_max "8" xsd:string
property_value: metpo:range_min "8" xsd:string
property_value: qudt:ucumCode "%" xsd:string

[Term]
Expand Down Expand Up @@ -9926,7 +9926,7 @@ property_value: IAO:0000117 "Anthea Guo" xsd:string

[Term]
id: metpo:1003002
name: alkaphilic
name: alkaliphilic
def: "A pH growth preference in which an organism grows optimally at pH values above 9." [] {IAO:0000119="OMP:0005009", IAO:0000119="MICRO:0001549", IAO:0000119="OMP:0005010", IAO:0000119="ENVO:00002022", IAO:0000119="OMP:0005011"}
synonym: "alkaliphile" EXACT []
synonym: "alkaliphilic" EXACT []
Expand All @@ -9945,7 +9945,7 @@ is_a: metpo:1003000 ! pH growth preference

[Term]
id: metpo:1003004
name: obligately alkaphilic
name: obligately alkaliphilic
def: "A pH growth preference in which an organism requires alkaline conditions (typically pH above 8.5) for growth and cannot grow at neutral or acidic pH." [] {IAO:0000119="OMP:0007947", IAO:0000119="ENVO:00002022", IAO:0000119="MICRO:0001565", IAO:0000119="OMP:0005011", IAO:0000119="OMP:0007771"}
synonym: "obligate alkaliphile" EXACT []
synonym: "obligate alkaphilic" EXACT []
Expand All @@ -9955,7 +9955,7 @@ property_value: IAO:0000117 "Luke Wang" xsd:string

[Term]
id: metpo:1003005
name: facultatively alkaphilic
name: facultatively alkaliphilic
def: "A pH growth preference in which an organism can grow at alkaline pH but does not require it." [] {IAO:0000119="MICRO:0001558", IAO:0000119="OMP:0005009", IAO:0000119="OMP:0007947", IAO:0000119="OMP:0005011", IAO:0000119="OMP:0007771"}
synonym: "facultative alkaliphile" EXACT []
synonym: "facultative alkaphilic" EXACT []
Expand Down
8 changes: 4 additions & 4 deletions metpo.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -15549,7 +15549,7 @@
<qudt:ucumCode>%</qudt:ucumCode>
<oboInOwl:hasRelatedSynonym>Nad_&gt;8</oboInOwl:hasRelatedSynonym>
<rdfs:label>NaCl delta high</rdfs:label>
<metpo:range_max>8</metpo:range_max>
<metpo:range_min>8</metpo:range_min>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1000482"/>
Expand Down Expand Up @@ -21471,7 +21471,7 @@
<oboInOwl:hasExactSynonym>alkaliphilic</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>alkalophile</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>alkalophilic</oboInOwl:hasExactSynonym>
<rdfs:label>alkaphilic</rdfs:label>
<rdfs:label>alkaliphilic</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1003002"/>
Expand Down Expand Up @@ -21524,7 +21524,7 @@
<oboInOwl:hasExactSynonym>obligate alkaliphile</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>obligate alkaphilic</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>obligately alkaliphilic</oboInOwl:hasExactSynonym>
<rdfs:label>obligately alkaphilic</rdfs:label>
<rdfs:label>obligately alkaliphilic</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1003004"/>
Expand All @@ -21547,7 +21547,7 @@
<oboInOwl:hasExactSynonym>facultative alkaliphile</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>facultative alkaphilic</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>facultatively alkaliphilic</oboInOwl:hasExactSynonym>
<rdfs:label>facultatively alkaphilic</rdfs:label>
<rdfs:label>facultatively alkaliphilic</rdfs:label>
</owl:Class>
<owl:Axiom>
<owl:annotatedSource rdf:resource="https://w3id.org/metpo/1003005"/>
Expand Down
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