added test files

Author: dannyspadaro

tools/alevin-fry/test-data/10x_v2_permit.txt

@@ -0,0 +1,5 @@
+{
+  "cmd": "alevin-fry collate -i /home/nic/project/galaxytools/tools/alevin-fry/test-data/gpl/ -r /home/nic/project/galaxytools/tools/alevin-fry/test-data/ -t 8",
+  "compressed_output": false,
+  "version_str": "0.11.2"
+}

tools/alevin-fry/test-data/filtered3.bam

@@ -0,0 +1,23 @@
+{
+  "cmd": "alevin-fry generate-permit-list --input /home/nic/project/galaxytools/tools/alevin-fry/test-data/ --expected-ori fw --output-dir /home/nic/project/galaxytools/tools/alevin-fry/test-data/gpl/ --unfiltered-pl /home/nic/project/galaxytools/tools/alevin-fry/test-data/10x_v2_permit.txt",
+  "expected_ori": "+",
+  "gpl_options": {
+    "cmdline": "alevin-fry generate-permit-list --input /home/nic/project/galaxytools/tools/alevin-fry/test-data/ --expected-ori fw --output-dir /home/nic/project/galaxytools/tools/alevin-fry/test-data/gpl/ --unfiltered-pl /home/nic/project/galaxytools/tools/alevin-fry/test-data/10x_v2_permit.txt",
+    "expected_ori": "Forward",
+    "fmeth": {
+      "UnfilteredExternalList": [
+        "/home/nic/project/galaxytools/tools/alevin-fry/test-data/10x_v2_permit.txt",
+        10
+      ]
+    },
+    "input_dir": "/home/nic/project/galaxytools/tools/alevin-fry/test-data/",
+    "output_dir": "/home/nic/project/galaxytools/tools/alevin-fry/test-data/gpl/",
+    "threads": 8,
+    "velo_mode": false,
+    "version": "0.11.2"
+  },
+  "max-ambig-record": 3,
+  "permit-list-type": "unfiltered",
+  "velo_mode": false,
+  "version_str": "0.11.2"
+}