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fix coeffs location
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chemicaltoolbox/lirasearch/lirasearch.xml

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@@ -17,7 +17,7 @@
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python -m esp_dnn.predict -m ligand -i . -o . &&
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esp-surface-generator ligand.pdb.pqr ligand.pdb.tmesh &&
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sh-coeff-calculator . &&
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micromamba run -n lirasearch python /opt/scripts/lira_search_sdf.py --in_file rid_coeffs.csv --out_file output --out_keys keys.txt --database /opt/storage/rid_coeffs.csv --num_results $num_results &&
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micromamba run -n lirasearch python /opt/scripts/lira_search_sdf.py --in_file rid_coeffs.csv --out_file output --out_keys keys.txt --database ${database_select.fields.path}/rid_coeffs.csv --num_results $num_results &&
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mkdir search_results && rocksdb_to_sdf ${database_select.fields.path} keys.txt search_results &&
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micromamba run -n lirasearch python /opt/scripts/lira_super.py --target ligand.pdb --folder search_results &&
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cat search_results/*rotated.sdf >> '$output_sdf'

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