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Enhancement: enable bg_sortmerna 4.3.6+galaxy0 to consume a List of Pairs collection shape correctly #1891

@jennaj

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@jennaj

toolshed.g2.bx.psu.edu/repos/rnateam/sortmerna/bg_sortmerna/4.3.6+galaxy0
https://toolshed.g2.bx.psu.edu/view/rnateam/sortmerna/10b84b577117

List of Pairs collection fails to publish all of the sorted outputs back into the history.
https://usegalaxy.eu/u/jenj/h/test-sortmerna-jan-2025

Reported at https://help.galaxyproject.org/t/sortmerna-produces-incorrect-unaligned-files-when-using-collections/18023/. Please also see here for a workaround! You can still input collections of paired reads when using a slightly modified collection shape!

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