[WIP] examples for BEP044, Stim-BIDS#433
Draft
neuromechanist wants to merge 13 commits intobids-standard:masterfrom
Draft
[WIP] examples for BEP044, Stim-BIDS#433neuromechanist wants to merge 13 commits intobids-standard:masterfrom
neuromechanist wants to merge 13 commits intobids-standard:masterfrom
Conversation
Remi-Gau
reviewed
Apr 13, 2024
stimuli_structure/sub-sampleTimeVarying/eeg/sub-sampleTimeVarying_task-ThePresent_eeg.set
Show resolved
Hide resolved
dungscout96
force-pushed
the
stim_structure
branch
from
df8cd43 to
5afc751
Compare
Collaborator
|
I added examples of annotations for The Present movie watching experiment in which two separate sets of annotation files describe two different aspects of the movie (auditory and action viewing). This is in addition to the log luminance ratio annotation already provided by @neuromechanist for the same movie. |
Member
We could share an small template or some empty data (full data to be released in the future), or create an fMRI based example. |
bendichter
reviewed
Aug 6, 2024
dorahermes
reviewed
Dec 23, 2024
| "type": { | ||
| "Description": "The type of stimulus" | ||
| }, | ||
| "present": { |
Member
There was a problem hiding this comment.
Maybe add that this is a boolean? This seems to work as long as it's clarified. The Google Doc there was an optional URL column however.
neuromechanist
changed the title
Change lowercase 'type' and 'description' to proper BIDS field names 'Type' and 'Description' in stimulus JSON sidecar files. This resolves schema validation errors where the validator expects metadata fields to match exact capitalization defined in the BIDS schema. - Fix: type -> Type - Fix: description -> Description - Maintains strict schema compliance
This example demonstrates core BIDS stimuli structure that validates successfully with schema-based validation: - Basic stimuli catalog (stimuli.tsv/json) - Individual stimulus metadata (stim-*_*.json) - Proper BIDS field capitalization (Type, Description) - Clean structure without complex annotations Purpose: Test case for stimuli BEP validation and development.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
5 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Following bids-standard/bids-specification#153 and bids-standard/bids-specification#751, here is an example of the stimuli-directory with the current suggestions.
The
sub-sampleTimeVaryingcontains an EEG run while the participant was watching a movie.The
sub-sampleStillImage[will] contain an iEEG run of a participant while they were watching the Natural Scene Dataset (NSD) images.We will update the structure as the issues progress.
@dorahermes, is it possible to share an NSD-iEEG data run (or even the file header, or events.tsv)?
@dungscout96, can you add some other annotation files for the present?