Skip to content

Defaced derivative example should be in a pipeline subdirectory #2065

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
wants to merge 2 commits into
base: master
Choose a base branch
from
Open
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 2 additions & 2 deletions src/derivatives/introduction.md
Original file line number Diff line number Diff line change
Expand Up @@ -15,15 +15,15 @@ Examples:
A defaced T1w image would typically be made during the curation process and is thus under raw

```Text
sourcedata/private/sub-01/anat/sub-01_T1w.nii.gz
sourcedata/pre-deface/sub-01/anat/sub-01_T1w.nii.gz
sub-01/anat/sub-01_T1w.nii.gz
```

A defaced T1w image could also, in theory, be derived from a BIDS dataset and would thus be under derivatives

```Text
sub-01/anat/sub-01_T1w.nii.gz
derivatives/sub-01/anat/sub-01_desc-defaced_T1w.nii.gz
derivatives/defaced/sub-01/anat/sub-01_desc-defaced_T1w.nii.gz
```

## Derivatives storage and directory structure
Expand Down