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  • Due by October 20, 2015
    29/29 issues closed
  • Due by June 30, 2014
    31/31 issues closed
  • This milestone includes issues and discussion related to BIOM Format 2.0.0, which is necessary in order to have the BIOM project scale to tables of increasing size (e.g., thousands of samples and millions of observations). The milestone will include changes to the format itself (moving away from a JSON-based format), as well as changes to the supporting software. In addition to issues under this milestone, discussion/notes will also take place on the publicly-editable [BIOM Format wiki](https://github.com/biom-format/biom-format/wiki/_pages). All users, developers, collaborators, and adopters are invited and encouraged to give input as we shape the future of the BIOM project.

    Due by May 15, 2014
    50/50 issues closed
  • Convert to use the pyqi framework; minor bug/performance fixes.

    Due by August 27, 2013
    25/25 issues closed
  • No due date
    22/22 issues closed
  • This milestone includes performance optimizations that need to take place, specifically regarding loading/writing BIOM tables and benchmarking various underlying sparse matrix representations.

    No due date
    5/5 issues closed
  • No due date
    15/15 issues closed
  • Due by May 1, 2012
    3/3 issues closed
  • Due by May 30, 2012
    10/10 issues closed