biotope: v0.7.1

0.7.1 (2026-05-28)

Documentation

• landing: align commands surface and link tutorial as canonical onboarding (#28) (2862055)
• tutorial: admonition fixes + terminal-styled console blocks (#30) (5e864b4)

biotope: v0.7.0

0.7.0 (2026-05-25)

Features

• API: Croissant-driven KG workflow + agent-supported knowledge ingestion (#23) (57f1872)

biotope: v0.6.1

0.6.1 (2026-05-25)

Documentation

• examples: add airports-notes.md and airport-hubs.csv (#24) (29b1487)

biotope: v0.6.0

0.6.0 (2026-05-19)

Features

• add bio.tools registry integration to search command (72b996c)
• add composite scoring option to search command (d3c7d68)
• Add GitHub star count ranking to biotope search (7439f2b)
• add MCP registry status to biotope status command (668e720)
• enhance add and annotate commands to skip biotope's own annotation files (f38063e)
• enhance bio.tools integration with smart column labeling and composite scoring (9d32b83)
• enhance file management capabilities with mv command and improved metadata handling (#6) (21c9e3d)
• get: Add file download and annotation command (25de2a1)
• git-like metadata management (1cea6f6)
• git-like metadata management (1cea6f6)
• implement biotope search command for MCP registry integration (1aabef1)
• implement registry infrastructure for BioContext integration (dfebf6d)
• improve relevance scoring and GitHub API integration (64ac804)
• setuptools entry point (7e1f4c5)
• update init to more comprehensive workflow (#4) (bab0fc7)
• upgrade to git-on-top process, test battery, docs (5531d10)

Bug Fixes

• improve error handling for registry cache loading (efc1053)
• preserve registry ranking in combined search (5106907)

Build System

• add release-please for automated version bumping (6f82eba)

Refactoring

• optimize score normalization in BioToolsRegistry (c7d3791)
• streamline metadata context retrieval in Croissant file creation (28001cb)
• streamline test setup and metadata handling (4898529)
• use sha256 to have the same hashes in different python sessions (0ca1a16)

v0.5.0

What's Changed

• Enhance file management capabilities with mv command and improved metadata handling by @heispv in #6

New Contributors

• @heispv made their first contribution in #6

Full Changelog: v0.4.2...v0.5.0

v0.4.2

Full Changelog: v0.4.1...v0.4.2

v0.4.1

Full Changelog: v0.4.0...v0.4.1

v0.4.0

What's Changed

• add gitignore and explain in docs by @slobentanzer in #5

Full Changelog: v0.3.3...v0.4.0

v0.3.3

Full Changelog: v0.3.2...v0.3.3

v0.3.2

What's Changed

• update init to more comprehensive workflow by @slobentanzer in #4

Full Changelog: v0.3.1...v0.3.2