Hi!
I'm trying to run the following code:
from cameo.strain_design.heuristic.evolutionary_based import OptGene
result4 = optgene.run(target="EX_btd_RR_e",
biomass="BIOMASS_Ecoli_core_w_GAM",
substrate="glc__D_e",
max_evaluations=20000, population_size=200, max_knockouts=10,
plot=False, growth_coupled = True)
But when I run this, it starts loading some points on the graph but then I receive the following error:



When I do it without the growth_coupled option it works fine. I'm not sure what the problem could be.
Im working with the E. coli core model and I added the reacctions and metabolites that let the model produce EX_btd_RR_e.
The lower bound for the E. coli core biomass is set to 0 as well as the lower boud for EX_btd_RR_e.
Thanks in advanced,
Javiera
Hi!
I'm trying to run the following code:
But when I run this, it starts loading some points on the graph but then I receive the following error:
When I do it without the growth_coupled option it works fine. I'm not sure what the problem could be.
Im working with the E. coli core model and I added the reacctions and metabolites that let the model produce EX_btd_RR_e.
The lower bound for the E. coli core biomass is set to 0 as well as the lower boud for EX_btd_RR_e.
Thanks in advanced,
Javiera