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Issue 182 fixing bican biolink #183

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Merged
merged 10 commits into from
Jul 9, 2025
Merged

Issue 182 fixing bican biolink #183

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e25e4db
reverted changes made to bican_biolink in commit 3d45e74 (20241203) u…
puja-trivedi Jul 9, 2025
fb4c20e
Merge branch 'main' of https://github.com/atlaskb/models into issue_1…
puja-trivedi Jul 9, 2025
4d0ff82
fixing type. accidently removed ending quote from category's description
puja-trivedi Jul 9, 2025
25f3244
generate another formats for anatomical_structure model(s)
Jul 9, 2025
9ea9b81
Merge branch 'main' of https://github.com/atlaskb/models into issue_1…
puja-trivedi Jul 9, 2025
1d9cdcd
generate another formats for bke_taxonomy model(s)
Jul 9, 2025
b225551
Merge branch 'main' of https://github.com/atlaskb/models into issue_1…
puja-trivedi Jul 9, 2025
0291c11
Merge branch 'issue_182_fixing_bican_biolink' of https://github.com/p…
puja-trivedi Jul 9, 2025
2742d9b
generate another formats for genome_annotation model(s)
Jul 9, 2025
f00a209
generate another formats for library_generation model(s)
Jul 9, 2025
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16 changes: 8 additions & 8 deletions erdiagram-autogen/anatomical_structure.md
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Original file line number Diff line number Diff line change
Expand Up @@ -8,7 +8,7 @@ ParcellationAtlas {
string version
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -32,7 +32,7 @@ AnatomicalAnnotationSet {
string version
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -52,7 +52,7 @@ ParcellationColorScheme {
string version
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -70,7 +70,7 @@ ParcellationTerm {
string version
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -87,7 +87,7 @@ ParcellationTermSet {
string version
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -101,7 +101,7 @@ ParcellationTerminology {
string version
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -116,7 +116,7 @@ AnatomicalSpace {
string version
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -140,7 +140,7 @@ ImageDataset {
string version
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand Down
30 changes: 15 additions & 15 deletions erdiagram-autogen/bke_taxonomy.md
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Original file line number Diff line number Diff line change
Expand Up @@ -5,7 +5,7 @@ DisplayColor {
string color_hex_triplet
uriorcurieList xref
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -26,7 +26,7 @@ ColorPalette {
string description
uriorcurieList xref
iri_type iri
curieList category
uriorcurieList category
stringList type
boolean deprecated
stringList provided_by
Expand All @@ -38,7 +38,7 @@ MatrixFile {
uriorcurieList xref
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -54,7 +54,7 @@ Abbreviation {
string entity_type
uriorcurieList xref
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -66,7 +66,7 @@ Abbreviation {
CellSpecimen {
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -81,7 +81,7 @@ ObservationRow {
uriorcurieList xref
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -95,7 +95,7 @@ ObservationMatrix {
uriorcurieList xref
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -107,7 +107,7 @@ ObservationMatrix {
ObservationMatrixCreationProcess {
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -124,7 +124,7 @@ Cluster {
integer number_of_observations
uriorcurieList xref
iri_type iri
curieList category
uriorcurieList category
stringList type
narrative_text description
boolean deprecated
Expand All @@ -140,7 +140,7 @@ ClusterSet {
string description
uriorcurieList xref
iri_type iri
curieList category
uriorcurieList category
stringList type
boolean deprecated
stringList provided_by
Expand All @@ -150,7 +150,7 @@ ClusterSet {
ClusteringProcess {
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -169,7 +169,7 @@ CellTypeTaxon {
integer number_of_cells
uriorcurieList xref
iri_type iri
curieList category
uriorcurieList category
stringList type
boolean deprecated
stringList provided_by
Expand All @@ -185,7 +185,7 @@ CellTypeSet {
integer order
uriorcurieList xref
iri_type iri
curieList category
uriorcurieList category
stringList type
boolean deprecated
stringList provided_by
Expand All @@ -200,7 +200,7 @@ CellTypeTaxonomy {
string description
uriorcurieList xref
iri_type iri
curieList category
uriorcurieList category
stringList type
boolean deprecated
stringList provided_by
Expand All @@ -210,7 +210,7 @@ CellTypeTaxonomy {
CellTypeTaxonomyCreationProcess {
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand Down
6 changes: 3 additions & 3 deletions erdiagram-autogen/genome_annotation.md
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Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@ GenomeAssembly {
label_type in_taxon_label
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -27,7 +27,7 @@ GenomeAnnotation {
string reference_assembly
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand All @@ -45,7 +45,7 @@ GeneAnnotation {
string referenced_in
string id
iri_type iri
curieList category
uriorcurieList category
stringList type
label_type name
narrative_text description
Expand Down
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