[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

Author: pre-commit-ci[bot]

cellfinder/core/detect/detect.py

@@ -180,12 +180,10 @@ def main(
         cells = mp_3d_filter.process(async_results, locks, callback=callback)
 
     time_elapsed = datetime.now() - start_time
-    logger.debug(f"All Planes done. Found {len(cells)} cells in {format(time_elapsed)}")
-    print(
-        "Detection complete - all planes done in : {}".format(
-            time_elapsed
-        )
+    logger.debug(
+        f"All Planes done. Found {len(cells)} cells in {format(time_elapsed)}"
     )
+    print("Detection complete - all planes done in : {}".format(time_elapsed))
     return cells
 
 

cellfinder/core/detect/filters/volume/volume_filter.py

@@ -143,7 +143,9 @@ def get_results(self) -> List[Cell]:
 
         cells = []
 
-        logger.debug(f"Processing {len(self.cell_detector.coords_maps.items())} cells")
+        logger.debug(
+            f"Processing {len(self.cell_detector.coords_maps.items())} cells"
+        )
         for cell_id, cell_points in self.cell_detector.coords_maps.items():
             cell_volume = len(cell_points)
 
@@ -159,7 +161,7 @@ def get_results(self) -> List[Cell]:
                         Cell.UNKNOWN,
                     )
                 )
-                logger.debug(f"Found cell < max_cell_volume.")
+                logger.debug("Found cell < max_cell_volume.")
             else:
                 if cell_volume < self.max_cluster_size:
                     try:
@@ -181,7 +183,7 @@ def get_results(self) -> List[Cell]:
                                 Cell.UNKNOWN,
                             )
                         )
-                    logger.debug(f"Found cell < max_cluster_size.")
+                    logger.debug("Found cell < max_cluster_size.")
                 else:
                     cell_centre = get_structure_centre(cell_points)
                     cells.append(
@@ -194,7 +196,7 @@ def get_results(self) -> List[Cell]:
                             Cell.ARTIFACT,
                         )
                     )
-                    logger.debug(f"Found artifact cell.")
+                    logger.debug("Found artifact cell.")
 
         logger.debug("Finished splitting cell clusters.")
         return cells