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[Feature] Run cell detection on subvolume of an image and not just select z planes

enhancementNew feature or requestNew feature or request

Status: Open.

#468 In brainglobe/cellfinder;

· IgorTatarnikov opened on Nov 7, 2024

[Feature] expose GPU/CPU choice and other parameters to pytorch cellfinder version

enhancementNew feature or requestNew feature or request

good first issueGood for newcomersGood for newcomers

Status: Open.

#464 In brainglobe/cellfinder;

· alessandrofelder opened on Oct 18, 2024

[Feature] Inform the user when they supply just the weights in place of the full model

enhancementNew feature or requestNew feature or request

Status: Open.

#454 In brainglobe/cellfinder;

· IgorTatarnikov opened on Aug 21, 2024

Update pytorch version

enhancementNew feature or requestNew feature or request

Status: Open.

#451 In brainglobe/cellfinder;

· adamltyson opened on Aug 19, 2024

[Feature] an (existing, like ImageJ model zoo - or new) place to share cellfinder models

enhancementNew feature or requestNew feature or request

Status: Open.

#450 In brainglobe/cellfinder;

· alessandrofelder opened on Aug 9, 2024

Tests are failing with napari 0.5.0

bugSomething isn't workingSomething isn't working

Status: Open.

#443 In brainglobe/cellfinder;

· adamltyson opened on Jul 11, 2024

[Feature] Use a registry file for test data instead of hard-coding paths in conftest.py

enhancementNew feature or requestNew feature or request

Status: Open.

#439 In brainglobe/cellfinder;

· alessandrofelder opened on Jun 6, 2024

Check performance on Windows

enhancementNew feature or requestNew feature or request

Status: Open.

#426 In brainglobe/cellfinder;

· adamltyson opened on May 28, 2024

napari plugin does not allow use of trained weights (without model file)

enhancementNew feature or requestNew feature or request

Status: Open.

#425 In brainglobe/cellfinder;

· adamltyson opened on May 28, 2024

Improve printing & logging

enhancementNew feature or requestNew feature or request

Status: Open.

#424 In brainglobe/cellfinder;

· adamltyson opened on May 23, 2024

Move imports out of functions

enhancementNew feature or requestNew feature or request

Status: Open.

#423 In brainglobe/cellfinder;

· adamltyson opened on May 23, 2024

[BUG] Kernel crashes when running the example

bugSomething isn't workingSomething isn't working

Status: Open.

#415 In brainglobe/cellfinder;

· priya-velu5 opened on May 7, 2024