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datasources.tsv

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@@ -36,9 +36,9 @@ GeneOntology T http://www.ebi.ac.uk/QuickGO/ http://www.ebi.ac.uk/QuickGO/GTerm?
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Gramene Arabidopsis EnAt https://www.gramene.org/ https://plants.ensembl.org/id/$id ATMG01360 gene Arabidopsis thaliana 1 EnAt AT[\dCM]G\d{5} Gramene Arabidopsis ensembl.plant gene
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Gramene Genes DB Gg https://www.gramene.org/ https://archive.gramene.org/db/genes/search_gene?acc=$id GR:0060184 gene 1 Gg GR:\d+ Gramene Genes gramene.gene gene
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Gramene Literature Gl https://www.gramene.org/ https://www.gramene.org/db/literature/pub_search?ref_id=$id 6200 gene 0 Gl Gramene Literature gramene.reference gene
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Gramene Maize EnZm https://www.ensembl.org https://plants.ensembl.org/id/$id GRMZM2G174107 gene 1 EnZm Gramene Maize ensembl.plant gene
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Gramene Maize EnZm https://www.ensembl.org https://plants.ensembl.org/id/$id GRMZM2G174107 gene 1 EnZm ^GRMZM2G\d+$ Gramene Maize ensembl.plant gene
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Gramene Pathway Gp https://www.gramene.org/pathway AAH72400 pathway 1 Gp Gramene Pathway pathway
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Gramene Rice EnOj https://www.gramene.org/ https://plants.ensembl.org/id/$id Os05g0113900 gene 1 EnOj Gramene Rice ensembl.plant gene
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Gramene Rice EnOj https://www.gramene.org/ https://plants.ensembl.org/id/$id Os05g0113900 gene 1 EnOj ^Os\d.*$ Gramene Rice ensembl.plant gene
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Guide to Pharmacology Gpl http://www.guidetopharmacology.org/ https://www.guidetopharmacology.org/GRAC/LigandDisplayForward?ligandId=$id 1627 gene 1 ^\d+$ Guide to Pharmacology Targets P5458 iuphar.receptor gene
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Guide to Pharmacology Targets Gpt http://www.guidetopharmacology.org/ https://www.guidetopharmacology.org/GRAC/ObjectDisplayForward?objectId=$id 256 metabolite 1 ^\d+$ Guide to Pharmacology P595 iuphar.ligand metabolite
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HGNC H http://www.genenames.org https://www.genenames.org/data/gene-symbol-report/#!/symbol/$id DAPK1 gene Homo sapiens 1 urn:miriam:hgnc.symbol ^[A-Za-z0-9]+ HGNC Symbol P353 hgnc.symbol gene
@@ -110,7 +110,7 @@ RESID Res http://www.ebi.ac.uk/RESID/ http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?
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Rfam Rf https://rfam.org/family/$id RF00066 gene 1 Rf RF\d+ RFAM rfam gene
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RGD R https://rgd.mcw.edu/ https://rgd.mcw.edu/rgdweb/report/gene/main.html?id=$id 2018 gene Rattus norvegicus 1 urn:miriam:rgd ^\d{4,7}$ Rat Genome Database P3853 rgd gene
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Rhea Rh http://www.ebi.ac.uk/rhea/ http://www.ebi.ac.uk/rhea/reaction.xhtml?id=$id 12345 interaction 1 urn:miriam:rhea ^\d{5}$ Rhea rhea interaction
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Rice Ensembl Gene Os https://www.gramene.org/Oryza_sativa https://plants.ensembl.org/id/$id Os04g54800 gene Oryza sativa 1 Os Rice Ensembl Gene ensembl.plant gene
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Rice Ensembl Gene Os https://www.gramene.org/Oryza_sativa https://plants.ensembl.org/id/$id Os04g54800 gene Oryza sativa 1 Os ^Os.*$ Rice Ensembl Gene ensembl.plant gene
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SGD D http://www.yeastgenome.org/ http://www.yeastgenome.org/locus/$id S000028457 gene Saccharomyces cerevisiae 1 urn:miriam:sgd ^S\d+$ SGD P3406 sgd gene
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Small Molecule Pathway Database Sm http://www.smpdb.ca/pathways https://smpdb.ca/view/$id SMP00001 pathway 1 urn:miriam:smpdb ^SMP\d{5}$ Small Molecule Pathway Database smpdb pathway
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SMART Sma http://smart.embl-heidelberg.de/ http://smart.embl-heidelberg.de/smart/do_annotation.pl?DOMAIN=$id SM00015 protein 1 urn:miriam:smart ^SM\d{5}$ SMART P3524 smart protein

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