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Azurize panoply_fragpipe_search WDL (with tarred input file)#44

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aawdeh wants to merge 10 commits intobroadinstitute:devfrom
aawdeh:aa-azure-fragpipe-zip
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Azurize panoply_fragpipe_search WDL (with tarred input file)#44
aawdeh wants to merge 10 commits intobroadinstitute:devfrom
aawdeh:aa-azure-fragpipe-zip

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@aawdeh
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@aawdeh aawdeh commented May 13, 2024

Goal here is to have the WDL run on both GCP and Azure.

  • Changed Directory type to a tarred file -- as this was not working on Azure.
  • Updated paths such that /cromwell_root is now changed to current working directory in Azure (This also works in GCP.)

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