Create the Docker daemon config file if missing #785
Merged
VJalili merged 3 commits intobroadinstitute:mainfrom Mar 11, 2025
Merged
Create the Docker daemon config file if missing #785VJalili merged 3 commits intobroadinstitute:mainfrom
VJalili merged 3 commits intobroadinstitute:mainfrom
Conversation
epiercehoffman
approved these changes
Mar 11, 2025
Collaborator
epiercehoffman
left a comment
epiercehoffman
left a comment
There was a problem hiding this comment.
Thank you for the rapid fix!
3 tasks
MattWellie
pushed a commit
to populationgenomics/gatk-sv
that referenced
this pull request
Apr 7, 2025
* Add the de novo pipeline to Dockstore. * Update sv_pipeline_docker.yml
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
The
/etc/docker/daemon.jsonis not created/populated before enabling experimental features, which is charged after updating the base image of the runners to the current latest Ubuntu version in #781. This PR fixes the issue by creating the file if it does not already exist.