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Check breakpoint distance for each CPX interval and overall in SVConcordance#9324

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epiercehoffman merged 1 commit intomasterfrom
eph_cpx_concordance
Feb 4, 2026
Merged

Check breakpoint distance for each CPX interval and overall in SVConcordance#9324
epiercehoffman merged 1 commit intomasterfrom
eph_cpx_concordance

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@epiercehoffman epiercehoffman commented Feb 2, 2026

Updates

In SVConcordance, check the overall breakpoint distance and the breakpoint distance for each CPX interval, rather than just the overall breakpoint distance.

Testing

  • Unit & integration tests pass
  • GATK-SV SVConcordance workflow succeeded with updated docker image

@epiercehoffman epiercehoffman merged commit e8c49f6 into master Feb 4, 2026
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@epiercehoffman epiercehoffman deleted the eph_cpx_concordance branch February 4, 2026 20:29
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2 participants