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NCBI submission workflow updates viral-pipelines CI #3057: Pull request #583 synchronize by dpark01
6m 19s dp-ncbi
dp-ncbi
6m 19s
add optional skani scan of contigs to classify_single viral-pipelines CI #3056: Commit 793133e pushed by dpark01
6m 25s dp-ncbi
dp-ncbi
6m 25s
PR #583 CodeQL #299: by dpark01
1m 16s refs/pull/583/head
refs/pull/583/head
1m 16s
Merge pull request #584 from broadinstitute/ct-genbank_single-optiona… viral-pipelines CI #3055: Commit 89872c6 pushed by github-merge-queue bot
29m 38s master
master
29m 38s
Push on master CodeQL #298: by github-merge-queue bot
1m 15s master
master
1m 15s
Merge pull request #584 from broadinstitute/ct-genbank_single-optiona… viral-pipelines CI #3054: Commit 89872c6 pushed by github-merge-queue bot
2s gh-readonly-queue/master/pr-584-c9f794b2426dee1b6a3d9c4902e02dd5a495ee91
gh-readonly-queue/master/pr-584-c9f794b2426dee1b6a3d9c4902e02dd5a495ee91
2s
viral-pipelines CI viral-pipelines CI #3053: Merge group checks requested
30m 7s
30m 7s
Merge pull request #585 from broadinstitute/lk-augur-ancestral-root-s… viral-pipelines CI #3052: Commit c9f794b pushed by github-merge-queue bot
2s gh-readonly-queue/master/pr-585-bc0f5c28b00629e21002e6a755afe94264a16a8b
gh-readonly-queue/master/pr-585-bc0f5c28b00629e21002e6a755afe94264a16a8b
2s
viral-pipelines CI viral-pipelines CI #3051: Merge group checks requested
31m 2s
31m 2s
add exclude parameter to filter_subsample_sequences task and augur_from_msa workflow; improve handling of whitespace, empty lines, or absent last-line trailing newline in input include/exclude files viral-pipelines CI #3050: Pull request #586 opened by tomkinsc
32m 17s ct-expose-augur_from_msa-exclude
ct-expose-augur_from_msa-exclude
32m 17s
PR #586 CodeQL #297: by tomkinsc
1m 22s refs/pull/586/head
refs/pull/586/head
1m 22s
add exclude parameter to filter_subsample_sequences task and augur_fr… viral-pipelines CI #3049: Commit 6c2f50e pushed by tomkinsc
29m 1s ct-expose-augur_from_msa-exclude
ct-expose-augur_from_msa-exclude
29m 1s
Merge pull request #584 from broadinstitute/ct-genbank_single-optiona… viral-pipelines CI #3048: Commit 31fa335 pushed by github-merge-queue bot
6s gh-readonly-queue/master/pr-584-bc0f5c28b00629e21002e6a755afe94264a16a8b
gh-readonly-queue/master/pr-584-bc0f5c28b00629e21002e6a755afe94264a16a8b
6s
viral-pipelines CI viral-pipelines CI #3047: Merge group checks requested
4s
4s
Merge pull request #585 from broadinstitute/lk-augur-ancestral-root-s… viral-pipelines CI #3046: Commit 5fca5f1 pushed by github-merge-queue bot
2s gh-readonly-queue/master/pr-585-bc0f5c28b00629e21002e6a755afe94264a16a8b
gh-readonly-queue/master/pr-585-bc0f5c28b00629e21002e6a755afe94264a16a8b
2s
viral-pipelines CI viral-pipelines CI #3045: Merge group checks requested
7s
7s
Merge pull request #584 from broadinstitute/ct-genbank_single-optiona… viral-pipelines CI #3044: Commit 9f9e30e pushed by github-merge-queue bot
2s gh-readonly-queue/master/pr-584-5fca5f14ac50c425dd241056dda1a9dcdf5ebbeb
gh-readonly-queue/master/pr-584-5fca5f14ac50c425dd241056dda1a9dcdf5ebbeb
2s
viral-pipelines CI viral-pipelines CI #3043: Merge group checks requested
7s
7s
Exposed --root-sequence parameter of augur ancestral viral-pipelines CI #3042: Pull request #585 opened by lakras
29m 0s lk-augur-ancestral-root-sequence
lk-augur-ancestral-root-sequence
29m 0s
PR #585 CodeQL #296: by lakras
1m 17s refs/pull/585/head
refs/pull/585/head
1m 17s
NCBI submission workflow updates viral-pipelines CI #3041: Pull request #583 synchronize by dpark01
28m 42s dp-ncbi
dp-ncbi
28m 42s
percolate batch ids from library/flowcell -> sample/assembly tables viral-pipelines CI #3040: Commit cb8cc79 pushed by dpark01
28m 27s dp-ncbi
dp-ncbi
28m 27s
PR #583 CodeQL #295: by dpark01
1m 17s refs/pull/583/head
refs/pull/583/head
1m 17s
NCBI submission workflow updates viral-pipelines CI #3039: Pull request #583 synchronize by dpark01
28m 42s dp-ncbi
dp-ncbi
28m 42s
update submit_genbank viral-pipelines CI #3038: Commit 63dae6b pushed by dpark01
28m 36s dp-ncbi
dp-ncbi
28m 36s
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