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Swap out UG CollectAggregationMetrics docker image #1544

Merged
ekiernan merged 7 commits intodevelopfrom
np_update_picard_in_ug
Mar 18, 2025
Merged

Swap out UG CollectAggregationMetrics docker image #1544
ekiernan merged 7 commits intodevelopfrom
np_update_picard_in_ug

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@nikellepetrillo
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Description

Give your PR a concise yet descriptive title.
Please explain the changes you made here.
Explain the motivation for making this change. What existing problem does the pull request solve?
Mention any issues fixed, addressed, or otherwise related to this pull request, including issue numbers or hard links for issues in other repos.
You can delete these instructions once you have written your PR description.


Checklist

If you can answer "yes" to the following items, please add a checkmark next to the appropriate checklist item(s) and notify our WARP team by tagging @broadinstitute/warp-admins in a comment on this PR.

  • Did you add inputs, outputs, or tasks to a workflow?
  • Did you modify, delete or move: file paths, file names, input names, output names, or task names?
  • If you made a changelog update, did you update the pipeline version number?

@github-actions
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Remember to squash merge!

@github-actions
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🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
UltimaGenomicsWholeGenomeCramOnly.changelog.md has not been changed and needs to be updated
UltimaGenomicsWholeGenomeGermline.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

@github-actions
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🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
UltimaGenomicsWholeGenomeCramOnly.wdl has not been changed and needs updating
UltimaGenomicsWholeGenomeGermline.wdl has not been changed and needs updating
Some WDLs or changelog files need updating. See output for details.
validation_failed

@github-actions
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Remember to squash merge!

@github-actions
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🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
UltimaGenomicsWholeGenomeCramOnly.changelog.md has not been changed and needs to be updated
UltimaGenomicsWholeGenomeGermline.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

@github-actions
Copy link
Copy Markdown

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
UltimaGenomicsWholeGenomeCramOnly.wdl has not been changed and needs updating
UltimaGenomicsWholeGenomeGermline.wdl has not been changed and needs updating
Some WDLs or changelog files need updating. See output for details.
validation_failed

@github-actions
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Copy Markdown

Remember to squash merge!

@github-actions
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Copy Markdown

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

@github-actions
Copy link
Copy Markdown

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
UltimaGenomicsWholeGenomeCramOnly.changelog.md has not been changed and needs to be updated
UltimaGenomicsWholeGenomeGermline.changelog.md has not been changed and needs to be updated
Some changelog files need updating. See output for details.
validation_failed

@github-actions
Copy link
Copy Markdown

Remember to squash merge!

@github-actions
Copy link
Copy Markdown

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

@github-actions
Copy link
Copy Markdown

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

@github-actions
Copy link
Copy Markdown

Remember to squash merge!

@github-actions
Copy link
Copy Markdown

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

@github-actions
Copy link
Copy Markdown

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

@github-actions
Copy link
Copy Markdown

Remember to squash merge!

@github-actions
Copy link
Copy Markdown

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

@github-actions
Copy link
Copy Markdown

🔍Changelog Validation Results:

Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

@ekiernan ekiernan merged commit f02a72b into develop Mar 18, 2025
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4 participants