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add whitelist references to optimus#1767

Merged
rsc3 merged 3 commits intodevelopfrom
rc_3219_barcodes
Feb 11, 2026
Merged

add whitelist references to optimus#1767
rsc3 merged 3 commits intodevelopfrom
rc_3219_barcodes

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@rsc3 rsc3 commented Feb 9, 2026

Description

Adding a table to the optimus docs to point to our standard barcode whitelists


Checklist

If you can answer "yes" to the following items, please add a checkmark next to the appropriate checklist item(s) and notify our WARP team by tagging @broadinstitute/warp-admins in a comment on this PR.

  • Did you add inputs, outputs, or tasks to a workflow?
  • Did you modify, delete or move: file paths, file names, input names, output names, or task names?
  • If you made a changelog update, did you update the pipeline version number?

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github-actions bot commented Feb 9, 2026

Remember to squash merge!

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github-actions bot commented Feb 9, 2026

🔍Changelog Validation Results:

basename: missing operand
Try 'basename --help' for more information.
Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

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github-actions bot commented Feb 9, 2026

🔍Version Validation Results:

basename: missing operand
Try 'basename --help' for more information.
Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

Comment thread website/docs/Pipelines/Optimus_Pipeline/README.md Outdated
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@ekiernan ekiernan left a comment

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One suggestion, but lgtm! ty!

Co-authored-by: Elizabeth Kiernan <55763654+ekiernan@users.noreply.github.com>
@github-actions
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Remember to squash merge!

@github-actions
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🔍Version Validation Results:

basename: missing operand
Try 'basename --help' for more information.
Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

@github-actions
Copy link
Copy Markdown

🔍Changelog Validation Results:

basename: missing operand
Try 'basename --help' for more information.
Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

@github-actions
Copy link
Copy Markdown

Remember to squash merge!

@github-actions
Copy link
Copy Markdown

🔍Changelog Validation Results:

basename: missing operand
Try 'basename --help' for more information.
Comparing changelogs for pipelines that differ from the versions on 'origin/develop':
All changelog files are valid for this release.

@github-actions
Copy link
Copy Markdown

🔍Version Validation Results:

Comparing versions and changelogs for pipelines that differ from the versions on 'origin/staging':
All WDLs and changelog files appear to be valid for this release.

@rsc3 rsc3 merged commit 17725e9 into develop Feb 11, 2026
11 checks passed
@rsc3 rsc3 deleted the rc_3219_barcodes branch February 11, 2026 21:50
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3 participants