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Calculate statistics of molecular dynamics' mean square displacements

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msdstats

Calculate statistics of mean square displacements and diffusion coefficients from molecular dynamics simulations.

The package consists of a python script and a module written in fortran. To generate the fortran module it is necessary to compile it as follows:

f2py -c -m calcmsds msdconf.f90

The calcmsds.so should be placed in a folder that is defined in your $PATH/$PYTHONPATH variable.

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Calculate statistics of molecular dynamics' mean square displacements

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