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1.1.4 - More Pindel CPU control + fix for ASCAT -force

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@keiranmraine keiranmraine released this 19 Jul 22:59
1.1.4
9e1b00e
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keiranmraine Keiran Raine
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Learn about vigilant mode.

This is a back-port for problematic samples in the PanProstate analysis.

  • Provide parameter to allow user to lower max pindel threads for analysis proving to have huge memory spikes.
    • For CWL optionally provide an integer for pindelcpu in your json
    • For singularity provide -pindelcpu to the ds-wrapper.pl script
  • Add -force to ascat.pl execution, seems to have been lost along the way
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