WIP: Refactor - #4

Merged

colinvwood merged 29 commits into

mainfrom

Feb 27, 2026

Commits on Feb 11, 2026

standardize_metadata action, refactoring
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1811d57
update qSIP2 version
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388ddff
remove pickle formats, add SourcWADs type and formats, add wad calculation action
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6113c09

Commits on Feb 12, 2026

remake wad visualizer
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4533617
remake sample curves plot
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14d1ea8
remake density outlier plot
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a582d94
fix tooltip bug
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03dfd2c
remove comparison group finder thing
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72288b3

Commits on Feb 16, 2026

feature wads types & formats, refactor prevalence filtering action
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d9bc8c5

Commits on Feb 17, 2026

calculate eaf refactor and types & formats
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cfc10b4

Commits on Feb 19, 2026

eaf action and visualizer refactor, types changes
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b68dbd3
remove filtered features visualizer
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6f5d2f6
remove unused ggplot2 util
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e288f8c
separate qsip data constructors
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8ba8b79
lint
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f2eb350

Commits on Feb 23, 2026

naming, help text changes
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7373fde
feature table wads instead of feature data wads
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f141ea9

Commits on Feb 24, 2026

filtered features visualizer
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74af492

Commits on Feb 25, 2026

tutorial updates
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9222b64

Commits on Feb 26, 2026

usage examples for tutorial
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868e9ed

Commits on Feb 27, 2026

update env file for ci
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e8de6ab
try newer mac runner
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14d5895
use released channel
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0a6d5d5
ci changes
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e7e0737
use newer workflow
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177d4da
include pip as dependency
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bb225dd
try custom lib-community-ci.yml
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afec4c8
yml not yaml
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fdb3ded
remove @dev
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f97576f