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Add Zenodo and citation metadata#1156

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carstenartur merged 2 commits into
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feature/zenodo-support
Jun 23, 2026
Merged

Add Zenodo and citation metadata#1156
carstenartur merged 2 commits into
mainfrom
feature/zenodo-support

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@carstenartur

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Adds repository-level metadata for scientific citation and Zenodo archiving.

Changes:

  • Add CITATION.cff with author, ORCID, repository, license, and keywords
  • Add .zenodo.json with Zenodo software metadata, keywords, license, related identifiers, and ORCID

ORCID used: 0009-0005-1047-6381

Note: The README was not changed in this PR to avoid replacing the long existing README content through the contents API. A DOI badge and citation section can be added after the first Zenodo release DOI exists.

Copilot AI review requested due to automatic review settings June 22, 2026 20:06
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JUnit Test Overview Report

Generated on: 27980572751

Overall Statistics

  • Total Test Modules: 15
  • Total Test Files: 125
  • Total Tests: 1910
  • Enabled Tests: 1843 (96.5%)
  • Disabled Tests: 67 (3.5%)

Test Summary by Plugin

Plugin Test Files Total Tests Enabled Disabled Disabled %
sandbox_cleanup_application_test 1 36 36 0 0.0%
sandbox_common_test 35 353 351 2 0.6%
sandbox_css_cleanup_test 4 28 28 0 0.0%
sandbox_encoding_quickfix_test 4 16 16 0 0.0%
sandbox_functional_converter_test 31 545 519 26 4.8%
sandbox_int_to_enum_test 1 12 11 1 8.3%
sandbox_jface_cleanup_test 2 15 14 1 6.7%
sandbox_junit_cleanup_test 29 645 609 36 5.6%
sandbox_method_reuse_test 1 1 1 0 0.0%
sandbox_platform_helper_test 2 6 5 1 16.7%
sandbox_tools_test 1 2 2 0 0.0%
sandbox_triggerpattern_test 8 161 161 0 0.0%
sandbox_usage_view_test 2 23 23 0 0.0%
sandbox_use_general_type_test 1 29 29 0 0.0%
sandbox_xml_cleanup_test 3 38 38 0 0.0%

Disabled Tests Details

sandbox_common_test (2 disabled)

  • org.sandbox.jdt.ui.tests.quickfix.addresses.testChainedVisitorWithoutFirstMatchBug() - AstProcessorBuilder bug: chained ClassInstanceCreation visitor not called when first MethodInvocation visitor has no match (PR Fix standalone SubProgressMonitor transformation in JFace cleanup #678)
    • File: sandbox_common_test/src/org/sandbox/jdt/ui/tests/quickfix/ClassInstanceCreationVisitorTest.java:549
  • org.sandbox.jdt.ui.tests.quickfix.addresses.doWork() - AstProcessorBuilder bug: chained ClassInstanceCreation visitor not called when first MethodInvocation visitor has no match (PR Fix standalone SubProgressMonitor transformation in JFace cleanup #678)
    • File: sandbox_common_test/src/org/sandbox/jdt/ui/tests/quickfix/ClassInstanceCreationVisitorTest.java:557

sandbox_functional_converter_test (26 disabled)

  • org.sandbox.jdt.ui.tests.quickfix.validates.testLoopWithMapPut_ShouldNotConvert() - BUG: Collection modification detection not blocking conversion - Issue Functional Converter #670
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/Issue670StrictLoopRefactoringTest.java:285
  • org.sandbox.jdt.ui.tests.quickfix.validates.process() - BUG: Collection modification detection not blocking conversion - Issue Functional Converter #670
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/Issue670StrictLoopRefactoringTest.java:292
  • org.sandbox.jdt.ui.tests.quickfix.validates.testLoopModifyingDifferentCollection_CanConvert() - Different but acceptable behavior - converts to collect() instead of forEach()
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/Issue670StrictLoopRefactoringTest.java:351
  • org.sandbox.jdt.ui.tests.quickfix.validates.process() - Different but acceptable behavior - converts to collect() instead of forEach()
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/Issue670StrictLoopRefactoringTest.java:358
  • org.sandbox.jdt.ui.tests.quickfix.validates.testConcurrentCollection_SimpleIteration_CanConvert() - Different but acceptable behavior - converts to stream instead of enhanced-for
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/Issue670StrictLoopRefactoringTest.java:434
  • org.sandbox.jdt.ui.tests.quickfix.validates.testFieldAccessReceiverModification_ShouldNotConvert() - BUG: Field access modification detection not blocking conversion - Issue Functional Converter #670
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/Issue670StrictLoopRefactoringTest.java:547
  • org.sandbox.jdt.ui.tests.quickfix.validates.testGetterMethodReceiverModification_ShouldNotConvert() - BUG: IllegalArgumentException - Invalid identifier : >getList()< - needs fix in EnhancedForHandler
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/Issue670StrictLoopRefactoringTest.java:593
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testIterator_collectToList() - Iterator collect-to-List pipeline not yet implemented; re-enable when iterator patterns support collect/map/filter/reduce
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/IteratorLoopToStreamTest.java:210
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testIterator_collectToSet() - Iterator collect-to-Set pipeline not yet implemented; re-enable when iterator patterns support collect/map/filter/reduce
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/IteratorLoopToStreamTest.java:258
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testIterator_mapAndCollect() - Iterator map+collect pipeline not yet implemented; re-enable when iterator patterns support collect/map/filter/reduce
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/IteratorLoopToStreamTest.java:310
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testIterator_mapWithMethodReference() - Iterator map pipeline not yet implemented; re-enable when iterator patterns support collect/map/filter/reduce
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/IteratorLoopToStreamTest.java:360
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testIterator_filterAndCollect() - Iterator filter+collect pipeline not yet implemented; re-enable when iterator patterns support collect/map/filter/reduce
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/IteratorLoopToStreamTest.java:414
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testIterator_filterMapAndCollect() - Iterator filter+map+collect pipeline not yet implemented; re-enable when iterator patterns support collect/map/filter/reduce
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/IteratorLoopToStreamTest.java:470
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testIterator_sumReduction() - Iterator reduce pipeline not yet implemented; re-enable when iterator patterns support collect/map/filter/reduce
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/IteratorLoopToStreamTest.java:527
  • org.sandbox.jdt.ui.tests.quickfix.focuses.calculateSum() - Iterator reduce pipeline not yet implemented; re-enable when iterator patterns support collect/map/filter/reduce
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/IteratorLoopToStreamTest.java:534
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testIterator_withExternalModification_notConverted() - No reason specified
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/IteratorLoopToStreamTest.java:698
  • org.sandbox.jdt.ui.tests.quickfix.focuses.trackLast() - No reason specified
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/IteratorLoopToStreamTest.java:705
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testArraySourceCollect() - No reason specified
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/LoopRefactoringCollectTest.java:484
  • org.sandbox.jdt.ui.tests.quickfix.focuses.process() - No reason specified
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/LoopRefactoringCollectTest.java:489
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testArraySourceMapCollect() - No reason specified
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/LoopRefactoringCollectTest.java:527
  • org.sandbox.jdt.ui.tests.quickfix.focuses.process() - No reason specified
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/LoopRefactoringCollectTest.java:532
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testCollectWithSideEffects_ShouldNotConvert() - V2 incorrectly wraps counter++ as side-effect map instead of detecting external state modification
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/LoopRefactoringCollectTest.java:576
  • org.sandbox.jdt.ui.tests.quickfix.focuses.process() - V2 incorrectly wraps counter++ as side-effect map instead of detecting external state modification
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/LoopRefactoringCollectTest.java:582
  • org.sandbox.jdt.ui.tests.quickfix.focuses.testUnusedElement() - Pattern not converting in V1 - needs investigation
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/LoopRefactoringEdgeCasesTest.java:633
  • org.sandbox.jdt.ui.tests.quickfix.focuses.main() - Pattern not converting in V1 - needs investigation
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/LoopRefactoringEdgeCasesTest.java:639
  • org.sandbox.jdt.ui.tests.quickfix.focuses.MyTest() - Pattern not converting in V1 - needs investigation
    • File: sandbox_functional_converter_test/src/org/sandbox/jdt/ui/tests/quickfix/LoopRefactoringEdgeCasesTest.java:640

sandbox_int_to_enum_test (1 disabled)

  • org.eclipse.jdt.ui.tests.quickfix.Java22.IntToEnumCleanUpTest.testBasicIfElseToEnumSwitch() - Transformation logic not yet implemented - test documents expected behavior
    • File: sandbox_int_to_enum_test/src/org/eclipse/jdt/ui/tests/quickfix/Java22/IntToEnumCleanUpTest.java:80

sandbox_jface_cleanup_test (1 disabled)

  • org.sandbox.jdt.ui.tests.quickfix.method.testMissingSuperDisposeCleanup() - Requires TriggerPattern engine enhancements: override detection and body constraints
    • File: sandbox_jface_cleanup_test/src/org/sandbox/jdt/ui/tests/quickfix/MissingSuperDisposePluginTest.java:233

sandbox_junit_cleanup_test (36 disabled)

  • org.eclipse.jdt.ui.tests.quickfix.Java8.LostTestFinderTest.testNotYetImplemented() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/LostTestFinderTest.java:186
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationCombinationsTest.ignoredTest() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationCombinationsTest.java:131
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationCombinationsTest.testWithAssertions() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationCombinationsTest.java:136
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationCombinationsTest.migrates_suite_with_assertions_and_lifecycle() - @RunWith(Suite.class) to @suite transformation not fully working - actual output retains @RunWith
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationCombinationsTest.java:216
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationCombinationsTest.testIgnored() - Not ready
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationCombinationsTest.java:434
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationEdgeCasesTest.handles_combined_test_expected_and_timeout() - Combined @test(expected + timeout) transformation not yet implemented - both parameters need simultaneous migration
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationEdgeCasesTest.java:52
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationEdgeCasesTest.testIgnored() - Not yet implemented
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationEdgeCasesTest.java:176
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationEdgeCasesTest.handles_wildcard_static_imports() - Not yet implemented
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationEdgeCasesTest.java:184
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationIgnoreTest.ignoredTest() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationIgnoreTest.java:73
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationIgnoreTest.migrates_ignore_with_message() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationIgnoreTest.java:81
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationIgnoreTest.ignoredTestWithMessage() - Not yet implemented
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationIgnoreTest.java:110
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationIgnoreTest.migrates_multiple_ignored_tests() - Not yet implemented
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationIgnoreTest.java:118
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationIgnoreTest.ignoredTest1() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationIgnoreTest.java:156
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationIgnoreTest.ignoredTest2() - Temporarily disabled
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationIgnoreTest.java:161
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationIgnoreTest.activeTest() - Temporarily disabled
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationIgnoreTest.java:165
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationIgnoreTest.ignoredTestWithExplicitValue() - explicit value attribute
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationIgnoreTest.java:202
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationRulesToExtensionsTest.migrates_junit4_rules_to_junit5_extensions() - Rule migration parameterized test - TemporaryFolder output mismatch, ErrorCollector requires hamcrest not on test classpath
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationRulesToExtensionsTest.java:50
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationRunnersAdvancedTest.migrates_runWith_theories_to_parameterizedTest() - @RunWith(Theories.class) to @ParameterizedTest transformation not yet implemented
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationRunnersAdvancedTest.java:106
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationRunnersAdvancedTest.migrates_runWith_categories_to_suite_with_tags() - @RunWith(Categories.class) to @suite with @IncludeTags/@ExcludeTags transformation not yet implemented
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationRunnersAdvancedTest.java:157
  • org.eclipse.jdt.ui.tests.quickfix.Java8.MigrationTestAnnotationTest.migrates_test_timeout_with_other_parameters() - Combined @test(expected + timeout) transformation not yet implemented - both parameters need simultaneous migration
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/MigrationTestAnnotationTest.java:299
  • org.eclipse.jdt.ui.tests.quickfix.Java8.TriggerPatternPluginTest.testIgnored() - Not ready yet
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/TriggerPatternPluginTest.java:296
  • org.eclipse.jdt.ui.tests.quickfix.Java8.TriggerPatternPluginTest.ignoreJUnitPlugin_migrates_without_reason() - Not ready yet
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/TriggerPatternPluginTest.java:304
  • org.eclipse.jdt.ui.tests.quickfix.Java8.TriggerPatternPluginTest.testIgnored() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/TriggerPatternPluginTest.java:333
  • org.eclipse.jdt.ui.tests.quickfix.Java8.TriggerPatternPluginTest.v2_plugins_work_together_in_complex_class() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/TriggerPatternPluginTest.java:341
  • org.eclipse.jdt.ui.tests.quickfix.Java8.TriggerPatternPluginTest.testIgnored() - Not ready
    • File: sandbox_junit_cleanup_test/src/org/eclipse/jdt/ui/tests/quickfix/Java8/TriggerPatternPluginTest.java:422
  • org.sandbox.jdt.internal.corext.fix.helper.RewriteRuleTest.testRewriteRule_defaultValues() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/sandbox/jdt/internal/corext/fix/helper/RewriteRuleTest.java:130
  • org.sandbox.jdt.internal.corext.fix.helper.verifies.testSomething() - not implemented
    • File: sandbox_junit_cleanup_test/src/org/sandbox/jdt/internal/corext/fix/helper/TriggerPatternCleanupFrameworkTest.java:181
  • org.sandbox.jdt.internal.corext.fix.helper.verifies.testSomething() - not ready
    • File: sandbox_junit_cleanup_test/src/org/sandbox/jdt/internal/corext/fix/helper/TriggerPatternCleanupFrameworkTest.java:253
  • org.sandbox.jdt.internal.corext.fix.helper.verifies.testSingleMemberAnnotation_IgnoreToDisabled() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/sandbox/jdt/internal/corext/fix/helper/TriggerPatternCleanupFrameworkTest.java:428
  • org.sandbox.jdt.internal.corext.fix.helper.verifies.testFeature() - Feature not ready
    • File: sandbox_junit_cleanup_test/src/org/sandbox/jdt/internal/corext/fix/helper/TriggerPatternCleanupFrameworkTest.java:457
  • org.sandbox.jdt.internal.corext.fix.helper.verifies.testSomething() - TODO: implement
    • File: sandbox_junit_cleanup_test/src/org/sandbox/jdt/internal/corext/fix/helper/TriggerPatternCleanupFrameworkTest.java:495
  • org.sandbox.jdt.internal.corext.fix.helper.verifies.testSomething() - not ready
    • File: sandbox_junit_cleanup_test/src/org/sandbox/jdt/internal/corext/fix/helper/TriggerPatternCleanupFrameworkTest.java:651
  • org.sandbox.jdt.internal.corext.fix.helper.verifies.testSomething() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/sandbox/jdt/internal/corext/fix/helper/TriggerPatternCleanupFrameworkTest.java:689
  • org.sandbox.jdt.internal.corext.fix.helper.verifies.testSomething() - TODO: fix\nline breaks & special chars
    • File: sandbox_junit_cleanup_test/src/org/sandbox/jdt/internal/corext/fix/helper/TriggerPatternCleanupFrameworkTest.java:758
  • org.sandbox.jdt.internal.corext.fix.helper.verifies.testDsl_ignoreAnnotation_preservesValue() - No reason specified
    • File: sandbox_junit_cleanup_test/src/org/sandbox/jdt/internal/corext/fix/helper/TriggerPatternCleanupFrameworkTest.java:908
  • org.sandbox.jdt.internal.corext.fix.helper.verifies.testFeature() - Feature not ready
    • File: sandbox_junit_cleanup_test/src/org/sandbox/jdt/internal/corext/fix/helper/TriggerPatternCleanupFrameworkTest.java:937

sandbox_platform_helper_test (1 disabled)

  • org.sandbox.jdt.ui.tests.quickfix.Java9CleanUpTest.testPlatformStatusParametrized() - Temporary disable - import handling needs investigation
    • File: sandbox_platform_helper_test/src/org/sandbox/jdt/ui/tests/quickfix/Java9CleanUpTest.java:90

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Pull request overview

Adds repository-level scholarly metadata to support scientific citation workflows and Zenodo archiving for this project.

Changes:

  • Added CITATION.cff (CFF 1.2.0) with citation metadata including author + ORCID, repository URL, project URL, license, and keywords.
  • Added .zenodo.json with Zenodo software metadata including creators + ORCID, license, keywords, and related identifiers.

Reviewed changes

Copilot reviewed 2 out of 2 changed files in this pull request and generated no comments.

File Description
CITATION.cff Provides standardized citation metadata (CFF) for users and tooling.
.zenodo.json Supplies Zenodo deposition metadata for software releases and related links.

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Test Results

  225 files    225 suites   4m 9s ⏱️
2 779 tests 2 742 ✅ 37 💤 0 ❌
2 776 runs  2 739 ✅ 37 💤 0 ❌

Results for commit 23ca47f.

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✅ All Tests Passed

No test failures detected.


This comment is automatically updated with test failure details for each commit.

@carstenartur carstenartur merged commit 3824229 into main Jun 23, 2026
6 checks passed
@carstenartur carstenartur deleted the feature/zenodo-support branch June 23, 2026 03:01
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2 participants